Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-2Q5R1I4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-2Q5R1I4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-2Q5R1I4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-2Q5R1I4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-2Q5R1I4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-2Q5R1I4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav6-2Q5R1I4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-2Q5R1I4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-2Q5R1I4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-2Q5R1I4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-2Q5R1I4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-2Q5R1I4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-2Q5R1I4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-2Q5R1I4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.11■□□□□ 0.65
Trav6-2Q5R1I4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.11■□□□□ 0.65
Trav6-2Q5R1I4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-2Q5R1I4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-2Q5R1I4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-2Q5R1I4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-2Q5R1I4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Trav6-2Q5R1I4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-2Q5R1I4 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.1■□□□□ 0.65
Trav6-2Q5R1I4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.09■□□□□ 0.65
Trav6-2Q5R1I4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-2Q5R1I4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-2Q5R1I4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.09■□□□□ 0.65
Trav6-2Q5R1I4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.09■□□□□ 0.65
Trav6-2Q5R1I4 Gm40881-201ENSMUST00000223397 166 ntBASIC19.09■□□□□ 0.65
Trav6-2Q5R1I4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-2Q5R1I4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-2Q5R1I4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6-2Q5R1I4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6-2Q5R1I4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6-2Q5R1I4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-2Q5R1I4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-2Q5R1I4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trav6-2Q5R1I4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-2Q5R1I4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-2Q5R1I4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-2Q5R1I4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-2Q5R1I4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-2Q5R1I4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.07■□□□□ 0.64
Trav6-2Q5R1I4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-2Q5R1I4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.06■□□□□ 0.64
Trav6-2Q5R1I4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-2Q5R1I4 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.06■□□□□ 0.64
Trav6-2Q5R1I4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-2Q5R1I4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-2Q5R1I4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trav6-2Q5R1I4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-2Q5R1I4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-2Q5R1I4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-2Q5R1I4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-2Q5R1I4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav6-2Q5R1I4 Gm10399-202ENSMUST00000202768 748 ntBASIC19.04■□□□□ 0.64
Trav6-2Q5R1I4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.04■□□□□ 0.64
Trav6-2Q5R1I4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.04■□□□□ 0.64
Trav6-2Q5R1I4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trav6-2Q5R1I4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-2Q5R1I4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-2Q5R1I4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-2Q5R1I4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6-2Q5R1I4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6-2Q5R1I4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.03■□□□□ 0.64
Trav6-2Q5R1I4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6-2Q5R1I4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trav6-2Q5R1I4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.03■□□□□ 0.64
Trav6-2Q5R1I4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6-2Q5R1I4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav6-2Q5R1I4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-2Q5R1I4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-2Q5R1I4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-2Q5R1I4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-2Q5R1I4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-2Q5R1I4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-2Q5R1I4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-2Q5R1I4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19■□□□□ 0.63
Trav6-2Q5R1I4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trav6-2Q5R1I4 Gm22238-201ENSMUST00000175222 88 ntBASIC19■□□□□ 0.63
Trav6-2Q5R1I4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19■□□□□ 0.63
Trav6-2Q5R1I4 Gm8093-201ENSMUST00000128935 1892 ntBASIC19■□□□□ 0.63
Trav6-2Q5R1I4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav6-2Q5R1I4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6-2Q5R1I4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trav6-2Q5R1I4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-2Q5R1I4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-2Q5R1I4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav6-2Q5R1I4 Gm13241-201ENSMUST00000094493 780 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms