Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rnf20Q5DTM8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Rnf20Q5DTM8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rnf20Q5DTM8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rnf20Q5DTM8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.72■■□□□ 1.71
Rnf20Q5DTM8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rnf20Q5DTM8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rnf20Q5DTM8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rnf20Q5DTM8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rnf20Q5DTM8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf20Q5DTM8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf20Q5DTM8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf20Q5DTM8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf20Q5DTM8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf20Q5DTM8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf20Q5DTM8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf20Q5DTM8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf20Q5DTM8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf20Q5DTM8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf20Q5DTM8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf20Q5DTM8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
Rnf20Q5DTM8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Rnf20Q5DTM8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.71
Rnf20Q5DTM8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Rnf20Q5DTM8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rnf20Q5DTM8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.7■■□□□ 1.7
Rnf20Q5DTM8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Rnf20Q5DTM8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Rnf20Q5DTM8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rnf20Q5DTM8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rnf20Q5DTM8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rnf20Q5DTM8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rnf20Q5DTM8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rnf20Q5DTM8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.69■■□□□ 1.7
Rnf20Q5DTM8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rnf20Q5DTM8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rnf20Q5DTM8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rnf20Q5DTM8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.68■■□□□ 1.7
Rnf20Q5DTM8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rnf20Q5DTM8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rnf20Q5DTM8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC25.68■■□□□ 1.7
Rnf20Q5DTM8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rnf20Q5DTM8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rnf20Q5DTM8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Rnf20Q5DTM8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Rnf20Q5DTM8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Rnf20Q5DTM8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rnf20Q5DTM8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rnf20Q5DTM8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.67■■□□□ 1.7
Rnf20Q5DTM8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Rnf20Q5DTM8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rnf20Q5DTM8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rnf20Q5DTM8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rnf20Q5DTM8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rnf20Q5DTM8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Rnf20Q5DTM8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Rnf20Q5DTM8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rnf20Q5DTM8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rnf20Q5DTM8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rnf20Q5DTM8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.64■■□□□ 1.7
Rnf20Q5DTM8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rnf20Q5DTM8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rnf20Q5DTM8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Rnf20Q5DTM8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Rnf20Q5DTM8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Rnf20Q5DTM8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf20Q5DTM8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf20Q5DTM8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Rnf20Q5DTM8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Rnf20Q5DTM8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.62■■□□□ 1.69
Rnf20Q5DTM8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rnf20Q5DTM8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC25.62■■□□□ 1.69
Rnf20Q5DTM8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.61■■□□□ 1.69
Rnf20Q5DTM8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf20Q5DTM8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf20Q5DTM8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf20Q5DTM8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Rnf20Q5DTM8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.61■■□□□ 1.69
Rnf20Q5DTM8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf20Q5DTM8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf20Q5DTM8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rnf20Q5DTM8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rnf20Q5DTM8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.6■■□□□ 1.69
Rnf20Q5DTM8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.6■■□□□ 1.69
Rnf20Q5DTM8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Rnf20Q5DTM8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rnf20Q5DTM8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf20Q5DTM8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf20Q5DTM8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf20Q5DTM8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf20Q5DTM8 Gm10420-201ENSMUST00000121713 882 ntBASIC25.59■■□□□ 1.69
Rnf20Q5DTM8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.59■■□□□ 1.69
Rnf20Q5DTM8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf20Q5DTM8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf20Q5DTM8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf20Q5DTM8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC25.59■■□□□ 1.69
Rnf20Q5DTM8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rnf20Q5DTM8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Rnf20Q5DTM8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Rnf20Q5DTM8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.58■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms