Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC39.31■■■■□ 3.88
Pds5bQ4VA53 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC39.31■■■■□ 3.88
Pds5bQ4VA53 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
Pds5bQ4VA53 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
Pds5bQ4VA53 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC39.31■■■■□ 3.88
Pds5bQ4VA53 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
Pds5bQ4VA53 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC39.3■■■■□ 3.88
Pds5bQ4VA53 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC39.3■■■■□ 3.88
Pds5bQ4VA53 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
Pds5bQ4VA53 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
Pds5bQ4VA53 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
Pds5bQ4VA53 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC39.29■■■■□ 3.88
Pds5bQ4VA53 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
Pds5bQ4VA53 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC39.28■■■■□ 3.88
Pds5bQ4VA53 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC39.28■■■■□ 3.88
Pds5bQ4VA53 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC39.28■■■■□ 3.88
Pds5bQ4VA53 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC39.27■■■■□ 3.88
Pds5bQ4VA53 Gm21168-201ENSMUST00000199646 1096 ntBASIC39.27■■■■□ 3.88
Pds5bQ4VA53 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
Pds5bQ4VA53 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
Pds5bQ4VA53 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC39.27■■■■□ 3.88
Pds5bQ4VA53 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
Pds5bQ4VA53 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
Pds5bQ4VA53 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
Pds5bQ4VA53 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
Pds5bQ4VA53 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC39.25■■■■□ 3.87
Pds5bQ4VA53 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Pds5bQ4VA53 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC39.24■■■■□ 3.87
Pds5bQ4VA53 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Pds5bQ4VA53 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC39.23■■■■□ 3.87
Pds5bQ4VA53 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC39.23■■■■□ 3.87
Pds5bQ4VA53 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
Pds5bQ4VA53 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC39.23■■■■□ 3.87
Pds5bQ4VA53 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC39.23■■■■□ 3.87
Pds5bQ4VA53 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
Pds5bQ4VA53 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
Pds5bQ4VA53 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
Pds5bQ4VA53 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC39.21■■■■□ 3.87
Pds5bQ4VA53 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC39.21■■■■□ 3.87
Pds5bQ4VA53 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Pds5bQ4VA53 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC39.2■■■■□ 3.87
Pds5bQ4VA53 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC39.2■■■■□ 3.87
Pds5bQ4VA53 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
Pds5bQ4VA53 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC39.19■■■■□ 3.86
Pds5bQ4VA53 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC39.19■■■■□ 3.86
Pds5bQ4VA53 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
Pds5bQ4VA53 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC39.18■■■■□ 3.86
Pds5bQ4VA53 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
Pds5bQ4VA53 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC39.18■■■■□ 3.86
Pds5bQ4VA53 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC39.18■■■■□ 3.86
Pds5bQ4VA53 Gm8093-201ENSMUST00000128935 1892 ntBASIC39.18■■■■□ 3.86
Pds5bQ4VA53 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
Pds5bQ4VA53 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
Pds5bQ4VA53 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC39.17■■■■□ 3.86
Pds5bQ4VA53 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC39.17■■■■□ 3.86
Pds5bQ4VA53 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
Pds5bQ4VA53 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
Pds5bQ4VA53 Fezf2-202ENSMUST00000224023 1917 ntBASIC39.14■■■■□ 3.86
Pds5bQ4VA53 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC39.14■■■■□ 3.86
Pds5bQ4VA53 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
Pds5bQ4VA53 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC39.13■■■■□ 3.85
Pds5bQ4VA53 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC39.12■■■■□ 3.85
Pds5bQ4VA53 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC39.12■■■■□ 3.85
Pds5bQ4VA53 Gm9207-201ENSMUST00000198773 1115 ntBASIC39.12■■■■□ 3.85
Pds5bQ4VA53 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
Pds5bQ4VA53 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
Pds5bQ4VA53 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC39.11■■■■□ 3.85
Pds5bQ4VA53 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC39.11■■■■□ 3.85
Pds5bQ4VA53 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
Pds5bQ4VA53 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
Pds5bQ4VA53 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC39.09■■■■□ 3.85
Pds5bQ4VA53 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
Pds5bQ4VA53 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
Pds5bQ4VA53 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC39.08■■■■□ 3.85
Pds5bQ4VA53 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
Pds5bQ4VA53 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
Pds5bQ4VA53 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC39.08■■■■□ 3.85
Pds5bQ4VA53 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
Pds5bQ4VA53 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC39.07■■■■□ 3.85
Pds5bQ4VA53 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC39.07■■■■□ 3.85
Pds5bQ4VA53 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
Pds5bQ4VA53 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC39.06■■■■□ 3.84
Pds5bQ4VA53 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC39.06■■■■□ 3.84
Pds5bQ4VA53 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
Pds5bQ4VA53 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Pds5bQ4VA53 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Pds5bQ4VA53 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC39.06■■■■□ 3.84
Pds5bQ4VA53 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Pds5bQ4VA53 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Pds5bQ4VA53 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC39.05■■■■□ 3.84
Pds5bQ4VA53 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC39.03■■■■□ 3.84
Pds5bQ4VA53 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC39.03■■■■□ 3.84
Pds5bQ4VA53 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
Pds5bQ4VA53 Gm5874-201ENSMUST00000096101 508 ntBASIC39.03■■■■□ 3.84
Pds5bQ4VA53 Gm43017-201ENSMUST00000198296 752 ntBASIC39.02■■■■□ 3.84
Pds5bQ4VA53 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
Pds5bQ4VA53 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC39.01■■■■□ 3.84
Pds5bQ4VA53 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC39.01■■■■□ 3.84
Pds5bQ4VA53 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC39.01■■■■□ 3.84
Pds5bQ4VA53 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC39.01■■■■□ 3.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms