Protein–RNA interactions for Protein: Q3V0X2

Cldn34b4, 4930428D18Rik protein, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b4Q3V0X2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.3■□□□□ 0.84
Cldn34b4Q3V0X2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cldn34b4Q3V0X2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn34b4Q3V0X2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn34b4Q3V0X2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.29■□□□□ 0.84
Cldn34b4Q3V0X2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cldn34b4Q3V0X2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.29■□□□□ 0.84
Cldn34b4Q3V0X2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn34b4Q3V0X2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.29■□□□□ 0.84
Cldn34b4Q3V0X2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn34b4Q3V0X2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn34b4Q3V0X2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn34b4Q3V0X2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn34b4Q3V0X2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn34b4Q3V0X2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cldn34b4Q3V0X2 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.28■□□□□ 0.84
Cldn34b4Q3V0X2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cldn34b4Q3V0X2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.27■□□□□ 0.84
Cldn34b4Q3V0X2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn34b4Q3V0X2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cldn34b4Q3V0X2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Cldn34b4Q3V0X2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cldn34b4Q3V0X2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn34b4Q3V0X2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cldn34b4Q3V0X2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Cldn34b4Q3V0X2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cldn34b4Q3V0X2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn34b4Q3V0X2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.26■□□□□ 0.83
Cldn34b4Q3V0X2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn34b4Q3V0X2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cldn34b4Q3V0X2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn34b4Q3V0X2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn34b4Q3V0X2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cldn34b4Q3V0X2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.23■□□□□ 0.83
Cldn34b4Q3V0X2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn34b4Q3V0X2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn34b4Q3V0X2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn34b4Q3V0X2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn34b4Q3V0X2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn34b4Q3V0X2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cldn34b4Q3V0X2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cldn34b4Q3V0X2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cldn34b4Q3V0X2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn34b4Q3V0X2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn34b4Q3V0X2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.22■□□□□ 0.83
Cldn34b4Q3V0X2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.21■□□□□ 0.83
Cldn34b4Q3V0X2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn34b4Q3V0X2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.21■□□□□ 0.83
Cldn34b4Q3V0X2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn34b4Q3V0X2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn34b4Q3V0X2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn34b4Q3V0X2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn34b4Q3V0X2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn34b4Q3V0X2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn34b4Q3V0X2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn34b4Q3V0X2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cldn34b4Q3V0X2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn34b4Q3V0X2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cldn34b4Q3V0X2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn34b4Q3V0X2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Cldn34b4Q3V0X2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cldn34b4Q3V0X2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.18■□□□□ 0.82
Cldn34b4Q3V0X2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldn34b4Q3V0X2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldn34b4Q3V0X2 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.18■□□□□ 0.82
Cldn34b4Q3V0X2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.17■□□□□ 0.82
Cldn34b4Q3V0X2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn34b4Q3V0X2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn34b4Q3V0X2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.17■□□□□ 0.82
Cldn34b4Q3V0X2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn34b4Q3V0X2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn34b4Q3V0X2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn34b4Q3V0X2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldn34b4Q3V0X2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldn34b4Q3V0X2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn34b4Q3V0X2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn34b4Q3V0X2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.15■□□□□ 0.82
Cldn34b4Q3V0X2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.15■□□□□ 0.82
Cldn34b4Q3V0X2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn34b4Q3V0X2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn34b4Q3V0X2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cldn34b4Q3V0X2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.15■□□□□ 0.82
Cldn34b4Q3V0X2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn34b4Q3V0X2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Cldn34b4Q3V0X2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldn34b4Q3V0X2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cldn34b4Q3V0X2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms