Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Foxr1Q3UTB7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.14■■□□□ 1.13
Foxr1Q3UTB7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Foxr1Q3UTB7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxr1Q3UTB7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Foxr1Q3UTB7 Gm14117-201ENSMUST00000122417 843 ntBASIC22.13■■□□□ 1.13
Foxr1Q3UTB7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.13■■□□□ 1.13
Foxr1Q3UTB7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Foxr1Q3UTB7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Foxr1Q3UTB7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxr1Q3UTB7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.12■■□□□ 1.13
Foxr1Q3UTB7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxr1Q3UTB7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxr1Q3UTB7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxr1Q3UTB7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxr1Q3UTB7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Foxr1Q3UTB7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxr1Q3UTB7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxr1Q3UTB7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxr1Q3UTB7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxr1Q3UTB7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxr1Q3UTB7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxr1Q3UTB7 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.11■■□□□ 1.13
Foxr1Q3UTB7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
Foxr1Q3UTB7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Foxr1Q3UTB7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Foxr1Q3UTB7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr1Q3UTB7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr1Q3UTB7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr1Q3UTB7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr1Q3UTB7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr1Q3UTB7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Foxr1Q3UTB7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr1Q3UTB7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr1Q3UTB7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.1■■□□□ 1.13
Foxr1Q3UTB7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr1Q3UTB7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
Foxr1Q3UTB7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxr1Q3UTB7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Foxr1Q3UTB7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxr1Q3UTB7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxr1Q3UTB7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Foxr1Q3UTB7 Etf1-202ENSMUST00000180351 108 ntBASIC22.08■■□□□ 1.13
Foxr1Q3UTB7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.08■■□□□ 1.13
Foxr1Q3UTB7 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.08■■□□□ 1.13
Foxr1Q3UTB7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Foxr1Q3UTB7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Foxr1Q3UTB7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Foxr1Q3UTB7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Foxr1Q3UTB7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxr1Q3UTB7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.07■■□□□ 1.12
Foxr1Q3UTB7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxr1Q3UTB7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Foxr1Q3UTB7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.07■■□□□ 1.12
Foxr1Q3UTB7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Foxr1Q3UTB7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxr1Q3UTB7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxr1Q3UTB7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.07■■□□□ 1.12
Foxr1Q3UTB7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Foxr1Q3UTB7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Foxr1Q3UTB7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.06■■□□□ 1.12
Foxr1Q3UTB7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.06■■□□□ 1.12
Foxr1Q3UTB7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.06■■□□□ 1.12
Foxr1Q3UTB7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Foxr1Q3UTB7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Foxr1Q3UTB7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.05■■□□□ 1.12
Foxr1Q3UTB7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Foxr1Q3UTB7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Foxr1Q3UTB7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Foxr1Q3UTB7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.04■■□□□ 1.12
Foxr1Q3UTB7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Foxr1Q3UTB7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.04■■□□□ 1.12
Foxr1Q3UTB7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Foxr1Q3UTB7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Foxr1Q3UTB7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Foxr1Q3UTB7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Foxr1Q3UTB7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Foxr1Q3UTB7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Foxr1Q3UTB7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Foxr1Q3UTB7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Foxr1Q3UTB7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Foxr1Q3UTB7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Foxr1Q3UTB7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.02■■□□□ 1.12
Foxr1Q3UTB7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Foxr1Q3UTB7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Foxr1Q3UTB7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Foxr1Q3UTB7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.02■■□□□ 1.12
Foxr1Q3UTB7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Foxr1Q3UTB7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.01■■□□□ 1.11
Foxr1Q3UTB7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Foxr1Q3UTB7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.01■■□□□ 1.11
Foxr1Q3UTB7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Foxr1Q3UTB7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Foxr1Q3UTB7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Foxr1Q3UTB7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Foxr1Q3UTB7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22■■□□□ 1.11
Foxr1Q3UTB7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
Foxr1Q3UTB7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Foxr1Q3UTB7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
Foxr1Q3UTB7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms