Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Arhgef40Q3UPH7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Arhgef40Q3UPH7 Gm7417-201ENSMUST00000192950 473 ntBASIC32.71■■■□□ 2.83
Arhgef40Q3UPH7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Arhgef40Q3UPH7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
Arhgef40Q3UPH7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Arhgef40Q3UPH7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
Arhgef40Q3UPH7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC32.7■■■□□ 2.83
Arhgef40Q3UPH7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Arhgef40Q3UPH7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Arhgef40Q3UPH7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
Arhgef40Q3UPH7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC32.69■■■□□ 2.82
Arhgef40Q3UPH7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Arhgef40Q3UPH7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Arhgef40Q3UPH7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Arhgef40Q3UPH7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Arhgef40Q3UPH7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC32.67■■■□□ 2.82
Arhgef40Q3UPH7 Gm28731-201ENSMUST00000185564 1569 ntBASIC32.67■■■□□ 2.82
Arhgef40Q3UPH7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC32.67■■■□□ 2.82
Arhgef40Q3UPH7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Arhgef40Q3UPH7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Arhgef40Q3UPH7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
Arhgef40Q3UPH7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Arhgef40Q3UPH7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Arhgef40Q3UPH7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC32.65■■■□□ 2.82
Arhgef40Q3UPH7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC32.65■■■□□ 2.82
Arhgef40Q3UPH7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Arhgef40Q3UPH7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Arhgef40Q3UPH7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Arhgef40Q3UPH7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Arhgef40Q3UPH7 Gm8093-201ENSMUST00000128935 1892 ntBASIC32.62■■■□□ 2.81
Arhgef40Q3UPH7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Arhgef40Q3UPH7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Arhgef40Q3UPH7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Arhgef40Q3UPH7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
Arhgef40Q3UPH7 Gm11847-201ENSMUST00000125165 1119 ntBASIC32.61■■■□□ 2.81
Arhgef40Q3UPH7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC32.61■■■□□ 2.81
Arhgef40Q3UPH7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC32.61■■■□□ 2.81
Arhgef40Q3UPH7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Arhgef40Q3UPH7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Arhgef40Q3UPH7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC32.6■■■□□ 2.81
Arhgef40Q3UPH7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC32.59■■■□□ 2.81
Arhgef40Q3UPH7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
Arhgef40Q3UPH7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Arhgef40Q3UPH7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Arhgef40Q3UPH7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Arhgef40Q3UPH7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Arhgef40Q3UPH7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Arhgef40Q3UPH7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Arhgef40Q3UPH7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Arhgef40Q3UPH7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
Arhgef40Q3UPH7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Arhgef40Q3UPH7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Arhgef40Q3UPH7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Arhgef40Q3UPH7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Arhgef40Q3UPH7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Arhgef40Q3UPH7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC32.56■■■□□ 2.8
Arhgef40Q3UPH7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC32.56■■■□□ 2.8
Arhgef40Q3UPH7 Gm43034-201ENSMUST00000198678 1364 ntBASIC32.56■■■□□ 2.8
Arhgef40Q3UPH7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Arhgef40Q3UPH7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC32.55■■■□□ 2.8
Arhgef40Q3UPH7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Arhgef40Q3UPH7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Arhgef40Q3UPH7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Arhgef40Q3UPH7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Arhgef40Q3UPH7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Arhgef40Q3UPH7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Arhgef40Q3UPH7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Arhgef40Q3UPH7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC32.53■■■□□ 2.8
Arhgef40Q3UPH7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
Arhgef40Q3UPH7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Arhgef40Q3UPH7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Arhgef40Q3UPH7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Arhgef40Q3UPH7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Arhgef40Q3UPH7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC32.51■■■□□ 2.8
Arhgef40Q3UPH7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Arhgef40Q3UPH7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Arhgef40Q3UPH7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Arhgef40Q3UPH7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC32.51■■■□□ 2.79
Arhgef40Q3UPH7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Arhgef40Q3UPH7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Arhgef40Q3UPH7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Arhgef40Q3UPH7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Arhgef40Q3UPH7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC32.5■■■□□ 2.79
Arhgef40Q3UPH7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Arhgef40Q3UPH7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Arhgef40Q3UPH7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Arhgef40Q3UPH7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Arhgef40Q3UPH7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Arhgef40Q3UPH7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC32.48■■■□□ 2.79
Arhgef40Q3UPH7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Arhgef40Q3UPH7 Gm10399-202ENSMUST00000202768 748 ntBASIC32.47■■■□□ 2.79
Arhgef40Q3UPH7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Arhgef40Q3UPH7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Arhgef40Q3UPH7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC32.46■■■□□ 2.79
Arhgef40Q3UPH7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Arhgef40Q3UPH7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Arhgef40Q3UPH7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Arhgef40Q3UPH7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC32.46■■■□□ 2.79
Arhgef40Q3UPH7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms