Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Uspl1Q3ULM6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC28.29■■■□□ 2.12
Uspl1Q3ULM6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Uspl1Q3ULM6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Uspl1Q3ULM6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC28.29■■■□□ 2.12
Uspl1Q3ULM6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Uspl1Q3ULM6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Uspl1Q3ULM6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Uspl1Q3ULM6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Uspl1Q3ULM6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Uspl1Q3ULM6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Uspl1Q3ULM6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC28.27■■■□□ 2.12
Uspl1Q3ULM6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Uspl1Q3ULM6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Uspl1Q3ULM6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Uspl1Q3ULM6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Uspl1Q3ULM6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
Uspl1Q3ULM6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Uspl1Q3ULM6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Uspl1Q3ULM6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Uspl1Q3ULM6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC28.26■■■□□ 2.11
Uspl1Q3ULM6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Uspl1Q3ULM6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Uspl1Q3ULM6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Uspl1Q3ULM6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Uspl1Q3ULM6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Uspl1Q3ULM6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
Uspl1Q3ULM6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Uspl1Q3ULM6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Uspl1Q3ULM6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC28.24■■■□□ 2.11
Uspl1Q3ULM6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Uspl1Q3ULM6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Uspl1Q3ULM6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC28.23■■■□□ 2.11
Uspl1Q3ULM6 Gm5921-201ENSMUST00000075898 882 ntBASIC28.23■■■□□ 2.11
Uspl1Q3ULM6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Uspl1Q3ULM6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC28.23■■■□□ 2.11
Uspl1Q3ULM6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
Uspl1Q3ULM6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Uspl1Q3ULM6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Uspl1Q3ULM6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Uspl1Q3ULM6 Gm13238-201ENSMUST00000117655 780 ntBASIC28.22■■■□□ 2.11
Uspl1Q3ULM6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC28.22■■■□□ 2.11
Uspl1Q3ULM6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC28.22■■■□□ 2.11
Uspl1Q3ULM6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Uspl1Q3ULM6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Uspl1Q3ULM6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Uspl1Q3ULM6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Uspl1Q3ULM6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC28.21■■■□□ 2.11
Uspl1Q3ULM6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC28.21■■■□□ 2.11
Uspl1Q3ULM6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Uspl1Q3ULM6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Uspl1Q3ULM6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Uspl1Q3ULM6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.2■■■□□ 2.1
Uspl1Q3ULM6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC28.2■■■□□ 2.1
Uspl1Q3ULM6 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.2■■■□□ 2.1
Uspl1Q3ULM6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Uspl1Q3ULM6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Uspl1Q3ULM6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Uspl1Q3ULM6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC28.19■■■□□ 2.1
Uspl1Q3ULM6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC28.19■■■□□ 2.1
Uspl1Q3ULM6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC28.19■■■□□ 2.1
Uspl1Q3ULM6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Uspl1Q3ULM6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Uspl1Q3ULM6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Uspl1Q3ULM6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Uspl1Q3ULM6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC28.18■■■□□ 2.1
Uspl1Q3ULM6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Uspl1Q3ULM6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Uspl1Q3ULM6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Uspl1Q3ULM6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Uspl1Q3ULM6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Uspl1Q3ULM6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
Uspl1Q3ULM6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Uspl1Q3ULM6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Uspl1Q3ULM6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Uspl1Q3ULM6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
Uspl1Q3ULM6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Uspl1Q3ULM6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Uspl1Q3ULM6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
Uspl1Q3ULM6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC28.15■■■□□ 2.1
Uspl1Q3ULM6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC28.15■■■□□ 2.1
Uspl1Q3ULM6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC28.15■■■□□ 2.1
Uspl1Q3ULM6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC28.14■■■□□ 2.1
Uspl1Q3ULM6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Uspl1Q3ULM6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC28.14■■■□□ 2.1
Uspl1Q3ULM6 Gm45444-201ENSMUST00000211394 898 ntBASIC28.14■■■□□ 2.1
Uspl1Q3ULM6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
Uspl1Q3ULM6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Uspl1Q3ULM6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Uspl1Q3ULM6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Uspl1Q3ULM6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Uspl1Q3ULM6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC28.13■■■□□ 2.09
Uspl1Q3ULM6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.12■■■□□ 2.09
Uspl1Q3ULM6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC28.12■■■□□ 2.09
Uspl1Q3ULM6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Uspl1Q3ULM6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Uspl1Q3ULM6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Uspl1Q3ULM6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Uspl1Q3ULM6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.11■■■□□ 2.09
Uspl1Q3ULM6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 164.4 ms