Protein–RNA interactions for Protein: Q3U6N9

UPF0488 protein C8orf33 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U6N9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.78■□□□□ 0.92
Q3U6N9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.78■□□□□ 0.92
Q3U6N9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q3U6N9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q3U6N9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Q3U6N9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Q3U6N9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.77■□□□□ 0.92
Q3U6N9 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.77■□□□□ 0.92
Q3U6N9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q3U6N9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Q3U6N9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q3U6N9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q3U6N9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q3U6N9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.76■□□□□ 0.91
Q3U6N9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Q3U6N9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.75■□□□□ 0.91
Q3U6N9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.75■□□□□ 0.91
Q3U6N9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.75■□□□□ 0.91
Q3U6N9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q3U6N9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Q3U6N9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Q3U6N9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q3U6N9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q3U6N9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q3U6N9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q3U6N9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q3U6N9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Q3U6N9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q3U6N9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
Q3U6N9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q3U6N9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.72■□□□□ 0.91
Q3U6N9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.72■□□□□ 0.91
Q3U6N9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.72■□□□□ 0.91
Q3U6N9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.72■□□□□ 0.91
Q3U6N9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.72■□□□□ 0.91
Q3U6N9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Q3U6N9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Q3U6N9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Q3U6N9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q3U6N9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.7■□□□□ 0.9
Q3U6N9 Gm10399-202ENSMUST00000202768 748 ntBASIC20.7■□□□□ 0.9
Q3U6N9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q3U6N9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q3U6N9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.7■□□□□ 0.9
Q3U6N9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q3U6N9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3U6N9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3U6N9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.69■□□□□ 0.9
Q3U6N9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3U6N9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3U6N9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3U6N9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q3U6N9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.68■□□□□ 0.9
Q3U6N9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Q3U6N9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q3U6N9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q3U6N9 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.67■□□□□ 0.9
Q3U6N9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q3U6N9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.67■□□□□ 0.9
Q3U6N9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q3U6N9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q3U6N9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q3U6N9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q3U6N9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q3U6N9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q3U6N9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q3U6N9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Q3U6N9 Gm15039-201ENSMUST00000118914 875 ntBASIC20.66■□□□□ 0.9
Q3U6N9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Q3U6N9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q3U6N9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q3U6N9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3U6N9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3U6N9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.65■□□□□ 0.9
Q3U6N9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3U6N9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3U6N9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Q3U6N9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Q3U6N9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Q3U6N9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.64■□□□□ 0.89
Q3U6N9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q3U6N9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q3U6N9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Q3U6N9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q3U6N9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q3U6N9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q3U6N9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q3U6N9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q3U6N9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q3U6N9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q3U6N9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q3U6N9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q3U6N9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.62■□□□□ 0.89
Q3U6N9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Q3U6N9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q3U6N9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q3U6N9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q3U6N9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q3U6N9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Q3U6N9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 281.2 ms