Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pkd1l3Q2EG98 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pkd1l3Q2EG98 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pkd1l3Q2EG98 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pkd1l3Q2EG98 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.45■□□□□ 0.7
Pkd1l3Q2EG98 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pkd1l3Q2EG98 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pkd1l3Q2EG98 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pkd1l3Q2EG98 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Pkd1l3Q2EG98 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkd1l3Q2EG98 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkd1l3Q2EG98 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pkd1l3Q2EG98 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkd1l3Q2EG98 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkd1l3Q2EG98 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkd1l3Q2EG98 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pkd1l3Q2EG98 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pkd1l3Q2EG98 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.43■□□□□ 0.7
Pkd1l3Q2EG98 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.43■□□□□ 0.7
Pkd1l3Q2EG98 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkd1l3Q2EG98 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkd1l3Q2EG98 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pkd1l3Q2EG98 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pkd1l3Q2EG98 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.42■□□□□ 0.7
Pkd1l3Q2EG98 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkd1l3Q2EG98 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pkd1l3Q2EG98 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkd1l3Q2EG98 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.41■□□□□ 0.7
Pkd1l3Q2EG98 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkd1l3Q2EG98 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.41■□□□□ 0.7
Pkd1l3Q2EG98 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.41■□□□□ 0.7
Pkd1l3Q2EG98 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.41■□□□□ 0.7
Pkd1l3Q2EG98 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pkd1l3Q2EG98 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkd1l3Q2EG98 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.41■□□□□ 0.7
Pkd1l3Q2EG98 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkd1l3Q2EG98 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkd1l3Q2EG98 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkd1l3Q2EG98 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkd1l3Q2EG98 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pkd1l3Q2EG98 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkd1l3Q2EG98 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkd1l3Q2EG98 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkd1l3Q2EG98 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkd1l3Q2EG98 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.4■□□□□ 0.7
Pkd1l3Q2EG98 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Pkd1l3Q2EG98 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.39■□□□□ 0.69
Pkd1l3Q2EG98 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkd1l3Q2EG98 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkd1l3Q2EG98 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkd1l3Q2EG98 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.38■□□□□ 0.69
Pkd1l3Q2EG98 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkd1l3Q2EG98 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkd1l3Q2EG98 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkd1l3Q2EG98 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkd1l3Q2EG98 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pkd1l3Q2EG98 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pkd1l3Q2EG98 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Pkd1l3Q2EG98 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.36■□□□□ 0.69
Pkd1l3Q2EG98 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkd1l3Q2EG98 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.35■□□□□ 0.69
Pkd1l3Q2EG98 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkd1l3Q2EG98 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pkd1l3Q2EG98 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkd1l3Q2EG98 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkd1l3Q2EG98 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkd1l3Q2EG98 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pkd1l3Q2EG98 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pkd1l3Q2EG98 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.34■□□□□ 0.69
Pkd1l3Q2EG98 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.34■□□□□ 0.69
Pkd1l3Q2EG98 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pkd1l3Q2EG98 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pkd1l3Q2EG98 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pkd1l3Q2EG98 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pkd1l3Q2EG98 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.33■□□□□ 0.69
Pkd1l3Q2EG98 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.33■□□□□ 0.68
Pkd1l3Q2EG98 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pkd1l3Q2EG98 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pkd1l3Q2EG98 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pkd1l3Q2EG98 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pkd1l3Q2EG98 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pkd1l3Q2EG98 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pkd1l3Q2EG98 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.32■□□□□ 0.68
Pkd1l3Q2EG98 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pkd1l3Q2EG98 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.32■□□□□ 0.68
Pkd1l3Q2EG98 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pkd1l3Q2EG98 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pkd1l3Q2EG98 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pkd1l3Q2EG98 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.32■□□□□ 0.68
Pkd1l3Q2EG98 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.32■□□□□ 0.68
Pkd1l3Q2EG98 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.32■□□□□ 0.68
Pkd1l3Q2EG98 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pkd1l3Q2EG98 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pkd1l3Q2EG98 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pkd1l3Q2EG98 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pkd1l3Q2EG98 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pkd1l3Q2EG98 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pkd1l3Q2EG98 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pkd1l3Q2EG98 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pkd1l3Q2EG98 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 129.7 ms