Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Xrn1P97789 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Xrn1P97789 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Xrn1P97789 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC31.92■■■□□ 2.7
Xrn1P97789 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Xrn1P97789 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Xrn1P97789 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC31.91■■■□□ 2.7
Xrn1P97789 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Xrn1P97789 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Xrn1P97789 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC31.89■■■□□ 2.7
Xrn1P97789 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Xrn1P97789 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Xrn1P97789 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Xrn1P97789 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Xrn1P97789 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Xrn1P97789 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Xrn1P97789 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Xrn1P97789 Serp2-204ENSMUST00000228055 705 ntBASIC31.86■■■□□ 2.69
Xrn1P97789 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Xrn1P97789 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC31.86■■■□□ 2.69
Xrn1P97789 AC140930.3-201ENSMUST00000222935 274 ntBASIC31.86■■■□□ 2.69
Xrn1P97789 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Xrn1P97789 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
Xrn1P97789 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC31.85■■■□□ 2.69
Xrn1P97789 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Xrn1P97789 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC31.84■■■□□ 2.69
Xrn1P97789 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Xrn1P97789 Gm45417-201ENSMUST00000209533 758 ntBASIC31.83■■■□□ 2.69
Xrn1P97789 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Xrn1P97789 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Xrn1P97789 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
Xrn1P97789 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC31.82■■■□□ 2.68
Xrn1P97789 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Xrn1P97789 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC31.81■■■□□ 2.68
Xrn1P97789 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC31.81■■■□□ 2.68
Xrn1P97789 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC31.8■■■□□ 2.68
Xrn1P97789 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Xrn1P97789 Appbp2os-202ENSMUST00000206972 447 ntBASIC31.8■■■□□ 2.68
Xrn1P97789 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Xrn1P97789 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Xrn1P97789 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
Xrn1P97789 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Xrn1P97789 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC31.79■■■□□ 2.68
Xrn1P97789 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
Xrn1P97789 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC31.79■■■□□ 2.68
Xrn1P97789 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Xrn1P97789 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
Xrn1P97789 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Xrn1P97789 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Xrn1P97789 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Xrn1P97789 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Xrn1P97789 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Xrn1P97789 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Xrn1P97789 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Xrn1P97789 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Xrn1P97789 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Xrn1P97789 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Xrn1P97789 Gm42699-201ENSMUST00000198104 1657 ntBASIC31.77■■■□□ 2.68
Xrn1P97789 Golgb1-201ENSMUST00000023534 498 ntBASIC31.77■■■□□ 2.68
Xrn1P97789 Gm28731-201ENSMUST00000185564 1569 ntBASIC31.77■■■□□ 2.68
Xrn1P97789 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Xrn1P97789 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC31.76■■■□□ 2.67
Xrn1P97789 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Xrn1P97789 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Xrn1P97789 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Xrn1P97789 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Xrn1P97789 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
Xrn1P97789 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Xrn1P97789 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Xrn1P97789 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC31.74■■■□□ 2.67
Xrn1P97789 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Xrn1P97789 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Xrn1P97789 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC31.72■■■□□ 2.67
Xrn1P97789 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Xrn1P97789 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Xrn1P97789 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Xrn1P97789 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Xrn1P97789 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Xrn1P97789 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Xrn1P97789 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC31.7■■■□□ 2.67
Xrn1P97789 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC31.7■■■□□ 2.66
Xrn1P97789 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Xrn1P97789 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
Xrn1P97789 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Xrn1P97789 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Xrn1P97789 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC31.68■■■□□ 2.66
Xrn1P97789 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
Xrn1P97789 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Xrn1P97789 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Xrn1P97789 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Xrn1P97789 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC31.65■■■□□ 2.66
Xrn1P97789 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC31.65■■■□□ 2.66
Xrn1P97789 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Xrn1P97789 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC31.65■■■□□ 2.66
Xrn1P97789 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
Xrn1P97789 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Xrn1P97789 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Xrn1P97789 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Xrn1P97789 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Xrn1P97789 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC31.63■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms