Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim4P70271 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim4P70271 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim4P70271 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pdlim4P70271 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim4P70271 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim4P70271 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim4P70271 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.85■□□□□ 0.45
Pdlim4P70271 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim4P70271 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pdlim4P70271 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pdlim4P70271 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.85■□□□□ 0.45
Pdlim4P70271 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim4P70271 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim4P70271 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Pdlim4P70271 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim4P70271 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim4P70271 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim4P70271 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim4P70271 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.84■□□□□ 0.45
Pdlim4P70271 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim4P70271 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim4P70271 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim4P70271 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pdlim4P70271 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Pdlim4P70271 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pdlim4P70271 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim4P70271 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Pdlim4P70271 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim4P70271 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.83■□□□□ 0.44
Pdlim4P70271 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.83■□□□□ 0.44
Pdlim4P70271 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim4P70271 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim4P70271 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim4P70271 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Pdlim4P70271 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pdlim4P70271 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.82■□□□□ 0.44
Pdlim4P70271 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim4P70271 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim4P70271 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pdlim4P70271 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim4P70271 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pdlim4P70271 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim4P70271 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.82■□□□□ 0.44
Pdlim4P70271 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim4P70271 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim4P70271 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim4P70271 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pdlim4P70271 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim4P70271 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim4P70271 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim4P70271 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pdlim4P70271 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim4P70271 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim4P70271 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pdlim4P70271 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim4P70271 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim4P70271 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim4P70271 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim4P70271 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim4P70271 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.8■□□□□ 0.44
Pdlim4P70271 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim4P70271 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim4P70271 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pdlim4P70271 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim4P70271 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pdlim4P70271 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim4P70271 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim4P70271 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim4P70271 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pdlim4P70271 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.78■□□□□ 0.44
Pdlim4P70271 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim4P70271 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim4P70271 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim4P70271 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim4P70271 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim4P70271 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim4P70271 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Pdlim4P70271 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pdlim4P70271 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pdlim4P70271 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pdlim4P70271 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pdlim4P70271 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.76■□□□□ 0.43
Pdlim4P70271 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim4P70271 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim4P70271 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim4P70271 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim4P70271 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Pdlim4P70271 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.76■□□□□ 0.43
Pdlim4P70271 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim4P70271 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim4P70271 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.76■□□□□ 0.43
Pdlim4P70271 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim4P70271 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pdlim4P70271 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim4P70271 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim4P70271 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.75■□□□□ 0.43
Pdlim4P70271 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pdlim4P70271 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim4P70271 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms