Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Crnkl1P63154 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Crnkl1P63154 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.25■□□□□ 0.99
Crnkl1P63154 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
Crnkl1P63154 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.25■□□□□ 0.99
Crnkl1P63154 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Crnkl1P63154 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Crnkl1P63154 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Crnkl1P63154 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Crnkl1P63154 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Crnkl1P63154 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Crnkl1P63154 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Crnkl1P63154 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Crnkl1P63154 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Crnkl1P63154 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Crnkl1P63154 Gm11599-201ENSMUST00000118720 878 ntBASIC21.23■□□□□ 0.99
Crnkl1P63154 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.23■□□□□ 0.99
Crnkl1P63154 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Crnkl1P63154 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crnkl1P63154 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crnkl1P63154 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Crnkl1P63154 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Crnkl1P63154 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Crnkl1P63154 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.22■□□□□ 0.99
Crnkl1P63154 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crnkl1P63154 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crnkl1P63154 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crnkl1P63154 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Crnkl1P63154 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crnkl1P63154 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Crnkl1P63154 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crnkl1P63154 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Crnkl1P63154 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Crnkl1P63154 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crnkl1P63154 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.21■□□□□ 0.99
Crnkl1P63154 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Crnkl1P63154 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.2■□□□□ 0.98
Crnkl1P63154 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Crnkl1P63154 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Crnkl1P63154 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Crnkl1P63154 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Crnkl1P63154 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crnkl1P63154 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crnkl1P63154 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Crnkl1P63154 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crnkl1P63154 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crnkl1P63154 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Crnkl1P63154 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
Crnkl1P63154 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Crnkl1P63154 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Crnkl1P63154 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Crnkl1P63154 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.17■□□□□ 0.98
Crnkl1P63154 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Crnkl1P63154 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Crnkl1P63154 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Crnkl1P63154 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Crnkl1P63154 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Crnkl1P63154 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Crnkl1P63154 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Crnkl1P63154 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Crnkl1P63154 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Crnkl1P63154 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Crnkl1P63154 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
Crnkl1P63154 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Crnkl1P63154 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Crnkl1P63154 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Crnkl1P63154 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Crnkl1P63154 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Crnkl1P63154 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Crnkl1P63154 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Crnkl1P63154 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Crnkl1P63154 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Crnkl1P63154 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Crnkl1P63154 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Crnkl1P63154 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Crnkl1P63154 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Crnkl1P63154 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Crnkl1P63154 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Crnkl1P63154 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Crnkl1P63154 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Crnkl1P63154 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.1■□□□□ 0.97
Crnkl1P63154 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Crnkl1P63154 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.09■□□□□ 0.97
Crnkl1P63154 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Crnkl1P63154 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Crnkl1P63154 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Crnkl1P63154 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Crnkl1P63154 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Crnkl1P63154 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Crnkl1P63154 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Crnkl1P63154 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Crnkl1P63154 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Crnkl1P63154 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Crnkl1P63154 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Crnkl1P63154 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.07■□□□□ 0.96
Crnkl1P63154 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Crnkl1P63154 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Crnkl1P63154 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Crnkl1P63154 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.07■□□□□ 0.96
Crnkl1P63154 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 193.5 ms