Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm6P62313 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm6P62313 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm6P62313 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm6P62313 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Lsm6P62313 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm6P62313 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm6P62313 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.93■□□□□ 0.62
Lsm6P62313 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.93■□□□□ 0.62
Lsm6P62313 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Lsm6P62313 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm6P62313 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.92■□□□□ 0.62
Lsm6P62313 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm6P62313 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm6P62313 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.92■□□□□ 0.62
Lsm6P62313 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm6P62313 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Lsm6P62313 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.91■□□□□ 0.62
Lsm6P62313 Gm12366-201ENSMUST00000121722 873 ntBASIC18.91■□□□□ 0.62
Lsm6P62313 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.91■□□□□ 0.62
Lsm6P62313 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.91■□□□□ 0.62
Lsm6P62313 Gm5786-201ENSMUST00000085368 882 ntBASIC18.91■□□□□ 0.62
Lsm6P62313 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Lsm6P62313 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm6P62313 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm6P62313 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.9■□□□□ 0.62
Lsm6P62313 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm6P62313 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm6P62313 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm6P62313 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm6P62313 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm6P62313 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lsm6P62313 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm6P62313 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm6P62313 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm6P62313 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Lsm6P62313 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm6P62313 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm6P62313 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm6P62313 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm6P62313 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm6P62313 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm6P62313 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm6P62313 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.88■□□□□ 0.61
Lsm6P62313 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm6P62313 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm6P62313 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Lsm6P62313 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm6P62313 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Lsm6P62313 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lsm6P62313 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm6P62313 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm6P62313 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Lsm6P62313 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm6P62313 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm6P62313 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm6P62313 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm6P62313 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm6P62313 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm6P62313 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm6P62313 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm6P62313 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.86■□□□□ 0.61
Lsm6P62313 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm6P62313 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm6P62313 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm6P62313 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.86■□□□□ 0.61
Lsm6P62313 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm6P62313 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm6P62313 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm6P62313 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.85■□□□□ 0.61
Lsm6P62313 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm6P62313 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.85■□□□□ 0.61
Lsm6P62313 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm6P62313 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm6P62313 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm6P62313 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm6P62313 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm6P62313 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.84■□□□□ 0.61
Lsm6P62313 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Lsm6P62313 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm6P62313 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.83■□□□□ 0.61
Lsm6P62313 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.83■□□□□ 0.6
Lsm6P62313 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.83■□□□□ 0.6
Lsm6P62313 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.83■□□□□ 0.6
Lsm6P62313 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm6P62313 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.82■□□□□ 0.6
Lsm6P62313 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm6P62313 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms