Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Tpm1P58771 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Tpm1P58771 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Tpm1P58771 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tpm1P58771 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tpm1P58771 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Tpm1P58771 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tpm1P58771 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Tpm1P58771 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Tpm1P58771 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tpm1P58771 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tpm1P58771 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Tpm1P58771 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.97■■□□□ 1.43
Tpm1P58771 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.97■■□□□ 1.43
Tpm1P58771 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.97■■□□□ 1.43
Tpm1P58771 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tpm1P58771 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tpm1P58771 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Tpm1P58771 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Tpm1P58771 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tpm1P58771 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tpm1P58771 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tpm1P58771 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tpm1P58771 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Tpm1P58771 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tpm1P58771 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tpm1P58771 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tpm1P58771 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tpm1P58771 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Tpm1P58771 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tpm1P58771 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tpm1P58771 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Tpm1P58771 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.93■■□□□ 1.42
Tpm1P58771 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Tpm1P58771 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Tpm1P58771 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.93■■□□□ 1.42
Tpm1P58771 Gm9812-201ENSMUST00000061934 968 ntBASIC23.93■■□□□ 1.42
Tpm1P58771 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Tpm1P58771 Gm22567-201ENSMUST00000175542 342 ntBASIC23.92■■□□□ 1.42
Tpm1P58771 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.92■■□□□ 1.42
Tpm1P58771 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Tpm1P58771 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Tpm1P58771 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.91■■□□□ 1.42
Tpm1P58771 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Tpm1P58771 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Tpm1P58771 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Tpm1P58771 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Tpm1P58771 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tpm1P58771 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.9■■□□□ 1.42
Tpm1P58771 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Tpm1P58771 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tpm1P58771 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tpm1P58771 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tpm1P58771 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Tpm1P58771 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Tpm1P58771 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Tpm1P58771 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Tpm1P58771 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Tpm1P58771 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.89■■□□□ 1.41
Tpm1P58771 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Tpm1P58771 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Tpm1P58771 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Tpm1P58771 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Tpm1P58771 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.88■■□□□ 1.41
Tpm1P58771 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tpm1P58771 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.88■■□□□ 1.41
Tpm1P58771 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
Tpm1P58771 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.87■■□□□ 1.41
Tpm1P58771 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tpm1P58771 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Tpm1P58771 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Tpm1P58771 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tpm1P58771 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tpm1P58771 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tpm1P58771 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Tpm1P58771 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Tpm1P58771 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tpm1P58771 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tpm1P58771 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tpm1P58771 Mir3960-201ENSMUST00000198213 73 ntBASIC23.85■■□□□ 1.41
Tpm1P58771 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tpm1P58771 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tpm1P58771 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.84■■□□□ 1.41
Tpm1P58771 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Tpm1P58771 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tpm1P58771 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tpm1P58771 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.84■■□□□ 1.41
Tpm1P58771 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
Tpm1P58771 Gm8503-201ENSMUST00000118131 455 ntBASIC23.83■■□□□ 1.41
Tpm1P58771 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Tpm1P58771 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Tpm1P58771 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Tpm1P58771 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Tpm1P58771 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Tpm1P58771 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Tpm1P58771 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Tpm1P58771 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Tpm1P58771 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Tpm1P58771 Terc-201ENSMUST00000082862 423 ntBASIC23.82■■□□□ 1.4
Tpm1P58771 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 344.1 ms