Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.41■■□□□ 1.02
Atxn1P54254 Gm45417-201ENSMUST00000209533 758 ntBASIC21.41■■□□□ 1.02
Atxn1P54254 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atxn1P54254 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.41■■□□□ 1.02
Atxn1P54254 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Atxn1P54254 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.4■■□□□ 1.02
Atxn1P54254 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Atxn1P54254 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Atxn1P54254 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Atxn1P54254 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Atxn1P54254 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.39■■□□□ 1.02
Atxn1P54254 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Atxn1P54254 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atxn1P54254 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atxn1P54254 Gm12922-201ENSMUST00000120626 809 ntBASIC21.38■■□□□ 1.01
Atxn1P54254 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Atxn1P54254 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.38■■□□□ 1.01
Atxn1P54254 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Atxn1P54254 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atxn1P54254 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atxn1P54254 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Atxn1P54254 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atxn1P54254 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atxn1P54254 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Atxn1P54254 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Atxn1P54254 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atxn1P54254 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atxn1P54254 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Atxn1P54254 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.37■■□□□ 1.01
Atxn1P54254 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.36■■□□□ 1.01
Atxn1P54254 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atxn1P54254 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atxn1P54254 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atxn1P54254 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atxn1P54254 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Atxn1P54254 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atxn1P54254 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Atxn1P54254 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atxn1P54254 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.35■■□□□ 1.01
Atxn1P54254 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Atxn1P54254 Gm8495-201ENSMUST00000188740 694 ntBASIC21.35■■□□□ 1.01
Atxn1P54254 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.35■■□□□ 1.01
Atxn1P54254 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.35■■□□□ 1.01
Atxn1P54254 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atxn1P54254 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atxn1P54254 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atxn1P54254 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atxn1P54254 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.34■■□□□ 1.01
Atxn1P54254 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atxn1P54254 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atxn1P54254 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atxn1P54254 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Atxn1P54254 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atxn1P54254 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.32■■□□□ 1
Atxn1P54254 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.32■■□□□ 1
Atxn1P54254 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atxn1P54254 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atxn1P54254 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atxn1P54254 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atxn1P54254 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atxn1P54254 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.31■■□□□ 1
Atxn1P54254 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Atxn1P54254 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atxn1P54254 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atxn1P54254 Gm40881-201ENSMUST00000223397 166 ntBASIC21.31■■□□□ 1
Atxn1P54254 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atxn1P54254 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atxn1P54254 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atxn1P54254 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atxn1P54254 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Atxn1P54254 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atxn1P54254 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atxn1P54254 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.3■■□□□ 1
Atxn1P54254 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Atxn1P54254 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atxn1P54254 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.3■■□□□ 1
Atxn1P54254 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Atxn1P54254 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Atxn1P54254 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Atxn1P54254 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atxn1P54254 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atxn1P54254 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.29■■□□□ 1
Atxn1P54254 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atxn1P54254 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Atxn1P54254 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.29■■□□□ 1
Atxn1P54254 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.29■■□□□ 1
Atxn1P54254 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atxn1P54254 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atxn1P54254 Gm29257-201ENSMUST00000186115 639 ntBASIC21.28■■□□□ 1
Atxn1P54254 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.28■■□□□ 1
Atxn1P54254 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Atxn1P54254 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Atxn1P54254 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.27■■□□□ 1
Atxn1P54254 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.27■■□□□ 1
Atxn1P54254 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.27■■□□□ 1
Atxn1P54254 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atxn1P54254 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Atxn1P54254 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atxn1P54254 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atxn1P54254 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms