Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Limk1P53668 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Limk1P53668 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Limk1P53668 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Limk1P53668 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.19■□□□□ 0.98
Limk1P53668 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Limk1P53668 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.19■□□□□ 0.98
Limk1P53668 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Limk1P53668 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Limk1P53668 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Limk1P53668 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Limk1P53668 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Limk1P53668 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Limk1P53668 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Limk1P53668 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Limk1P53668 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.17■□□□□ 0.98
Limk1P53668 Gm8495-201ENSMUST00000188740 694 ntBASIC21.17■□□□□ 0.98
Limk1P53668 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Limk1P53668 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.17■□□□□ 0.98
Limk1P53668 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.16■□□□□ 0.98
Limk1P53668 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Limk1P53668 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Limk1P53668 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Limk1P53668 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Limk1P53668 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Limk1P53668 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Limk1P53668 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.16■□□□□ 0.98
Limk1P53668 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Limk1P53668 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Limk1P53668 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Limk1P53668 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Limk1P53668 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Limk1P53668 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.15■□□□□ 0.98
Limk1P53668 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.15■□□□□ 0.98
Limk1P53668 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Limk1P53668 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.15■□□□□ 0.98
Limk1P53668 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Limk1P53668 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.14■□□□□ 0.98
Limk1P53668 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Limk1P53668 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.14■□□□□ 0.97
Limk1P53668 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Limk1P53668 Gm45417-201ENSMUST00000209533 758 ntBASIC21.14■□□□□ 0.97
Limk1P53668 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Limk1P53668 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Limk1P53668 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Limk1P53668 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Limk1P53668 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Limk1P53668 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Limk1P53668 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Limk1P53668 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Limk1P53668 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Limk1P53668 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Limk1P53668 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Limk1P53668 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Limk1P53668 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.1■□□□□ 0.97
Limk1P53668 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Limk1P53668 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Limk1P53668 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.1■□□□□ 0.97
Limk1P53668 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.1■□□□□ 0.97
Limk1P53668 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Limk1P53668 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Limk1P53668 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Limk1P53668 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Limk1P53668 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Limk1P53668 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Limk1P53668 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Limk1P53668 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Limk1P53668 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.09■□□□□ 0.97
Limk1P53668 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Limk1P53668 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Limk1P53668 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Limk1P53668 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Limk1P53668 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.08■□□□□ 0.97
Limk1P53668 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Limk1P53668 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Limk1P53668 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Limk1P53668 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Limk1P53668 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Limk1P53668 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Limk1P53668 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Limk1P53668 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Limk1P53668 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Limk1P53668 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Limk1P53668 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Limk1P53668 Gm18284-201ENSMUST00000172604 624 ntBASIC21.06■□□□□ 0.96
Limk1P53668 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.06■□□□□ 0.96
Limk1P53668 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Limk1P53668 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Limk1P53668 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Limk1P53668 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Limk1P53668 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Limk1P53668 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.05■□□□□ 0.96
Limk1P53668 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Limk1P53668 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.04■□□□□ 0.96
Limk1P53668 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Limk1P53668 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.04■□□□□ 0.96
Limk1P53668 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Limk1P53668 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Limk1P53668 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Limk1P53668 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms