Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GdnfP48540 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GdnfP48540 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.78■□□□□ 0.6
GdnfP48540 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GdnfP48540 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GdnfP48540 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GdnfP48540 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GdnfP48540 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GdnfP48540 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GdnfP48540 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GdnfP48540 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GdnfP48540 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GdnfP48540 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GdnfP48540 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.75■□□□□ 0.59
GdnfP48540 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GdnfP48540 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GdnfP48540 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GdnfP48540 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GdnfP48540 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GdnfP48540 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GdnfP48540 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GdnfP48540 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
GdnfP48540 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.74■□□□□ 0.59
GdnfP48540 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
GdnfP48540 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
GdnfP48540 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.73■□□□□ 0.59
GdnfP48540 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GdnfP48540 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GdnfP48540 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GdnfP48540 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GdnfP48540 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GdnfP48540 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.72■□□□□ 0.59
GdnfP48540 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
GdnfP48540 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GdnfP48540 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.72■□□□□ 0.59
GdnfP48540 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GdnfP48540 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GdnfP48540 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GdnfP48540 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GdnfP48540 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GdnfP48540 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GdnfP48540 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GdnfP48540 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GdnfP48540 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GdnfP48540 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
GdnfP48540 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GdnfP48540 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.71■□□□□ 0.59
GdnfP48540 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GdnfP48540 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GdnfP48540 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
GdnfP48540 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GdnfP48540 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
GdnfP48540 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GdnfP48540 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GdnfP48540 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GdnfP48540 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GdnfP48540 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.7■□□□□ 0.58
GdnfP48540 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GdnfP48540 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.7■□□□□ 0.58
GdnfP48540 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GdnfP48540 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GdnfP48540 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GdnfP48540 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GdnfP48540 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.69■□□□□ 0.58
GdnfP48540 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GdnfP48540 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GdnfP48540 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GdnfP48540 Terc-201ENSMUST00000082862 423 ntBASIC18.69■□□□□ 0.58
GdnfP48540 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.69■□□□□ 0.58
GdnfP48540 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GdnfP48540 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GdnfP48540 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GdnfP48540 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
GdnfP48540 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.68■□□□□ 0.58
GdnfP48540 Scarna2-201ENSMUST00000157560 414 ntBASIC18.68■□□□□ 0.58
GdnfP48540 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GdnfP48540 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GdnfP48540 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GdnfP48540 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GdnfP48540 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GdnfP48540 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GdnfP48540 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GdnfP48540 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GdnfP48540 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GdnfP48540 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GdnfP48540 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GdnfP48540 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GdnfP48540 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GdnfP48540 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.66■□□□□ 0.58
GdnfP48540 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GdnfP48540 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
GdnfP48540 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.66■□□□□ 0.58
GdnfP48540 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GdnfP48540 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GdnfP48540 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.65■□□□□ 0.58
GdnfP48540 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GdnfP48540 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
GdnfP48540 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GdnfP48540 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GdnfP48540 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms