Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.84■□□□□ 0.93
Tnfsf4P43488 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.84■□□□□ 0.93
Tnfsf4P43488 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfsf4P43488 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.84■□□□□ 0.93
Tnfsf4P43488 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.84■□□□□ 0.93
Tnfsf4P43488 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Tnfsf4P43488 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfsf4P43488 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfsf4P43488 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Tnfsf4P43488 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.83■□□□□ 0.93
Tnfsf4P43488 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.83■□□□□ 0.93
Tnfsf4P43488 Gm44428-201ENSMUST00000204474 874 ntBASIC20.83■□□□□ 0.93
Tnfsf4P43488 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfsf4P43488 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfsf4P43488 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfsf4P43488 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfsf4P43488 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tnfsf4P43488 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.82■□□□□ 0.92
Tnfsf4P43488 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfsf4P43488 Gm6311-201ENSMUST00000073790 878 ntBASIC20.82■□□□□ 0.92
Tnfsf4P43488 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfsf4P43488 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfsf4P43488 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Tnfsf4P43488 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfsf4P43488 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.81■□□□□ 0.92
Tnfsf4P43488 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfsf4P43488 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfsf4P43488 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf4P43488 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf4P43488 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf4P43488 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf4P43488 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf4P43488 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf4P43488 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.8■□□□□ 0.92
Tnfsf4P43488 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Tnfsf4P43488 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf4P43488 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tnfsf4P43488 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf4P43488 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf4P43488 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf4P43488 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Tnfsf4P43488 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf4P43488 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf4P43488 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf4P43488 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf4P43488 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf4P43488 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf4P43488 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.78■□□□□ 0.92
Tnfsf4P43488 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf4P43488 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf4P43488 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf4P43488 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf4P43488 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf4P43488 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf4P43488 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf4P43488 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Tnfsf4P43488 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Tnfsf4P43488 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Tnfsf4P43488 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf4P43488 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf4P43488 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfsf4P43488 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfsf4P43488 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.76■□□□□ 0.91
Tnfsf4P43488 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf4P43488 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.75■□□□□ 0.91
Tnfsf4P43488 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.75■□□□□ 0.91
Tnfsf4P43488 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsf4P43488 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsf4P43488 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsf4P43488 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Tnfsf4P43488 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsf4P43488 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.74■□□□□ 0.91
Tnfsf4P43488 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.74■□□□□ 0.91
Tnfsf4P43488 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsf4P43488 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Tnfsf4P43488 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsf4P43488 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Tnfsf4P43488 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsf4P43488 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsf4P43488 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tnfsf4P43488 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.73■□□□□ 0.91
Tnfsf4P43488 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Tnfsf4P43488 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tnfsf4P43488 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.72■□□□□ 0.91
Tnfsf4P43488 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Tnfsf4P43488 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Tnfsf4P43488 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.71■□□□□ 0.91
Tnfsf4P43488 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsf4P43488 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Tnfsf4P43488 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Tnfsf4P43488 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.7■□□□□ 0.91
Tnfsf4P43488 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf4P43488 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf4P43488 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Tnfsf4P43488 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Tnfsf4P43488 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.7■□□□□ 0.9
Tnfsf4P43488 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf4P43488 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf4P43488 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.7■□□□□ 0.9
Tnfsf4P43488 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms