Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nkx2-2P42586 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-2P42586 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-2P42586 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-2P42586 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-2P42586 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.91■□□□□ 0.78
Nkx2-2P42586 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nkx2-2P42586 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.91■□□□□ 0.78
Nkx2-2P42586 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Nkx2-2P42586 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.91■□□□□ 0.78
Nkx2-2P42586 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-2P42586 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-2P42586 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-2P42586 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-2P42586 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.9■□□□□ 0.78
Nkx2-2P42586 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-2P42586 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-2P42586 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-2P42586 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.9■□□□□ 0.78
Nkx2-2P42586 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-2P42586 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Nkx2-2P42586 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-2P42586 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Nkx2-2P42586 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-2P42586 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-2P42586 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Nkx2-2P42586 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-2P42586 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.88■□□□□ 0.77
Nkx2-2P42586 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.88■□□□□ 0.77
Nkx2-2P42586 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-2P42586 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-2P42586 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-2P42586 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-2P42586 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-2P42586 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-2P42586 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-2P42586 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.87■□□□□ 0.77
Nkx2-2P42586 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.87■□□□□ 0.77
Nkx2-2P42586 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Nkx2-2P42586 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-2P42586 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-2P42586 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.87■□□□□ 0.77
Nkx2-2P42586 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-2P42586 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Nkx2-2P42586 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-2P42586 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.86■□□□□ 0.77
Nkx2-2P42586 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.85■□□□□ 0.77
Nkx2-2P42586 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-2P42586 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-2P42586 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.85■□□□□ 0.77
Nkx2-2P42586 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.85■□□□□ 0.77
Nkx2-2P42586 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-2P42586 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-2P42586 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-2P42586 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nkx2-2P42586 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-2P42586 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-2P42586 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-2P42586 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-2P42586 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-2P42586 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Nkx2-2P42586 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Nkx2-2P42586 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-2P42586 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-2P42586 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-2P42586 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-2P42586 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-2P42586 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-2P42586 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.82■□□□□ 0.76
Nkx2-2P42586 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nkx2-2P42586 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nkx2-2P42586 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-2P42586 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-2P42586 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-2P42586 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.82■□□□□ 0.76
Nkx2-2P42586 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-2P42586 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.82■□□□□ 0.76
Nkx2-2P42586 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-2P42586 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-2P42586 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-2P42586 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Nkx2-2P42586 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nkx2-2P42586 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-2P42586 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Nkx2-2P42586 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-2P42586 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-2P42586 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-2P42586 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-2P42586 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-2P42586 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Nkx2-2P42586 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.79■□□□□ 0.76
Nkx2-2P42586 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Nkx2-2P42586 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Nkx2-2P42586 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-2P42586 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-2P42586 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.79■□□□□ 0.76
Nkx2-2P42586 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-2P42586 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Nkx2-2P42586 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-2P42586 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms