Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HmgclP38060 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HmgclP38060 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.38■■□□□ 1.01
HmgclP38060 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HmgclP38060 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HmgclP38060 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HmgclP38060 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HmgclP38060 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HmgclP38060 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HmgclP38060 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HmgclP38060 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
HmgclP38060 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.37■■□□□ 1.01
HmgclP38060 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HmgclP38060 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HmgclP38060 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
HmgclP38060 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HmgclP38060 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HmgclP38060 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.36■■□□□ 1.01
HmgclP38060 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.36■■□□□ 1.01
HmgclP38060 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
HmgclP38060 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HmgclP38060 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HmgclP38060 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HmgclP38060 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HmgclP38060 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.35■■□□□ 1.01
HmgclP38060 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HmgclP38060 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.35■■□□□ 1.01
HmgclP38060 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HmgclP38060 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HmgclP38060 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.35■■□□□ 1.01
HmgclP38060 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HmgclP38060 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
HmgclP38060 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.35■■□□□ 1.01
HmgclP38060 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HmgclP38060 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HmgclP38060 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.34■■□□□ 1.01
HmgclP38060 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HmgclP38060 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HmgclP38060 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HmgclP38060 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
HmgclP38060 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
HmgclP38060 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.33■■□□□ 1.01
HmgclP38060 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HmgclP38060 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.32■■□□□ 1
HmgclP38060 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
HmgclP38060 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HmgclP38060 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.32■■□□□ 1
HmgclP38060 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.32■■□□□ 1
HmgclP38060 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HmgclP38060 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.31■■□□□ 1
HmgclP38060 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HmgclP38060 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.31■■□□□ 1
HmgclP38060 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HmgclP38060 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.3■■□□□ 1
HmgclP38060 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.3■■□□□ 1
HmgclP38060 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.3■■□□□ 1
HmgclP38060 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.3■■□□□ 1
HmgclP38060 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HmgclP38060 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HmgclP38060 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
HmgclP38060 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
HmgclP38060 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HmgclP38060 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HmgclP38060 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HmgclP38060 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.29■■□□□ 1
HmgclP38060 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HmgclP38060 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HmgclP38060 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
HmgclP38060 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.28■■□□□ 1
HmgclP38060 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HmgclP38060 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.28■■□□□ 1
HmgclP38060 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.28■■□□□ 1
HmgclP38060 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HmgclP38060 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.27■■□□□ 1
HmgclP38060 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.27■■□□□ 1
HmgclP38060 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HmgclP38060 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.27■■□□□ 1
HmgclP38060 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HmgclP38060 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HmgclP38060 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HmgclP38060 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HmgclP38060 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HmgclP38060 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HmgclP38060 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HmgclP38060 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HmgclP38060 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HmgclP38060 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HmgclP38060 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HmgclP38060 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.25■□□□□ 0.99
HmgclP38060 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HmgclP38060 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
HmgclP38060 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HmgclP38060 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HmgclP38060 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HmgclP38060 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HmgclP38060 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HmgclP38060 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HmgclP38060 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HmgclP38060 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HmgclP38060 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms