Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa1P35582 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa1P35582 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa1P35582 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa1P35582 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa1P35582 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa1P35582 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa1P35582 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa1P35582 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa1P35582 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa1P35582 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa1P35582 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa1P35582 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa1P35582 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa1P35582 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Foxa1P35582 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Foxa1P35582 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxa1P35582 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxa1P35582 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Foxa1P35582 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxa1P35582 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Foxa1P35582 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Foxa1P35582 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxa1P35582 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa1P35582 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa1P35582 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa1P35582 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa1P35582 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa1P35582 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa1P35582 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Foxa1P35582 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Foxa1P35582 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.95■□□□□ 0.78
Foxa1P35582 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Foxa1P35582 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Foxa1P35582 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Foxa1P35582 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Foxa1P35582 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Foxa1P35582 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.94■□□□□ 0.78
Foxa1P35582 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.94■□□□□ 0.78
Foxa1P35582 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Foxa1P35582 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Foxa1P35582 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Foxa1P35582 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Foxa1P35582 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Foxa1P35582 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Foxa1P35582 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Foxa1P35582 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Foxa1P35582 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxa1P35582 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Foxa1P35582 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxa1P35582 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxa1P35582 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxa1P35582 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxa1P35582 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxa1P35582 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxa1P35582 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Foxa1P35582 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxa1P35582 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.93■□□□□ 0.78
Foxa1P35582 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Foxa1P35582 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.92■□□□□ 0.78
Foxa1P35582 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Foxa1P35582 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa1P35582 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Foxa1P35582 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Foxa1P35582 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Foxa1P35582 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.91■□□□□ 0.78
Foxa1P35582 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Foxa1P35582 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.91■□□□□ 0.78
Foxa1P35582 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Foxa1P35582 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Foxa1P35582 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Foxa1P35582 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Foxa1P35582 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Foxa1P35582 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.9■□□□□ 0.78
Foxa1P35582 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Foxa1P35582 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Foxa1P35582 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.89■□□□□ 0.77
Foxa1P35582 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.89■□□□□ 0.77
Foxa1P35582 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.89■□□□□ 0.77
Foxa1P35582 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.89■□□□□ 0.77
Foxa1P35582 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Foxa1P35582 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Foxa1P35582 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Foxa1P35582 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Foxa1P35582 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.87■□□□□ 0.77
Foxa1P35582 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Foxa1P35582 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Foxa1P35582 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms