Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Gm37415-201ENSMUST00000192265 2054 ntBASIC18■□□□□ 0.47
Rab3dP35276 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab3dP35276 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab3dP35276 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.99■□□□□ 0.47
Rab3dP35276 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rab3dP35276 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab3dP35276 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.99■□□□□ 0.47
Rab3dP35276 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab3dP35276 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab3dP35276 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rab3dP35276 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab3dP35276 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab3dP35276 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rab3dP35276 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rab3dP35276 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.98■□□□□ 0.47
Rab3dP35276 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Rab3dP35276 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab3dP35276 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab3dP35276 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab3dP35276 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab3dP35276 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.96■□□□□ 0.47
Rab3dP35276 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rab3dP35276 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab3dP35276 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab3dP35276 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.96■□□□□ 0.47
Rab3dP35276 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab3dP35276 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rab3dP35276 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab3dP35276 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rab3dP35276 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.95■□□□□ 0.46
Rab3dP35276 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab3dP35276 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab3dP35276 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab3dP35276 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.95■□□□□ 0.46
Rab3dP35276 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab3dP35276 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rab3dP35276 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab3dP35276 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Rab3dP35276 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab3dP35276 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.94■□□□□ 0.46
Rab3dP35276 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rab3dP35276 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab3dP35276 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.94■□□□□ 0.46
Rab3dP35276 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab3dP35276 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab3dP35276 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab3dP35276 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab3dP35276 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rab3dP35276 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rab3dP35276 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rab3dP35276 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.93■□□□□ 0.46
Rab3dP35276 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.93■□□□□ 0.46
Rab3dP35276 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rab3dP35276 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rab3dP35276 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.93■□□□□ 0.46
Rab3dP35276 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab3dP35276 Notumos-201ENSMUST00000151998 2659 ntBASIC17.93■□□□□ 0.46
Rab3dP35276 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab3dP35276 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab3dP35276 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab3dP35276 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rab3dP35276 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab3dP35276 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rab3dP35276 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab3dP35276 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab3dP35276 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab3dP35276 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab3dP35276 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab3dP35276 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rab3dP35276 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab3dP35276 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.91■□□□□ 0.46
Rab3dP35276 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab3dP35276 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab3dP35276 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rab3dP35276 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab3dP35276 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab3dP35276 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rab3dP35276 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.9■□□□□ 0.46
Rab3dP35276 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab3dP35276 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab3dP35276 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rab3dP35276 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rab3dP35276 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab3dP35276 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab3dP35276 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab3dP35276 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rab3dP35276 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab3dP35276 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab3dP35276 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab3dP35276 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab3dP35276 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.88■□□□□ 0.45
Rab3dP35276 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.88■□□□□ 0.45
Rab3dP35276 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.88■□□□□ 0.45
Rab3dP35276 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rab3dP35276 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rab3dP35276 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.87■□□□□ 0.45
Rab3dP35276 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab3dP35276 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab3dP35276 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.87■□□□□ 0.45
Rab3dP35276 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms