Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd40P27512 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd40P27512 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.62■□□□□ 0.73
Cd40P27512 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd40P27512 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd40P27512 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd40P27512 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd40P27512 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40P27512 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40P27512 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cd40P27512 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40P27512 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.61■□□□□ 0.73
Cd40P27512 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Cd40P27512 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40P27512 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40P27512 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40P27512 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40P27512 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cd40P27512 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd40P27512 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd40P27512 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd40P27512 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd40P27512 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd40P27512 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cd40P27512 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.59■□□□□ 0.73
Cd40P27512 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd40P27512 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cd40P27512 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.58■□□□□ 0.72
Cd40P27512 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.58■□□□□ 0.72
Cd40P27512 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cd40P27512 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.58■□□□□ 0.72
Cd40P27512 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cd40P27512 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd40P27512 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cd40P27512 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd40P27512 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd40P27512 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cd40P27512 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cd40P27512 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd40P27512 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cd40P27512 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.56■□□□□ 0.72
Cd40P27512 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd40P27512 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd40P27512 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.56■□□□□ 0.72
Cd40P27512 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd40P27512 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.56■□□□□ 0.72
Cd40P27512 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Cd40P27512 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cd40P27512 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd40P27512 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd40P27512 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cd40P27512 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd40P27512 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cd40P27512 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd40P27512 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd40P27512 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd40P27512 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cd40P27512 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.54■□□□□ 0.72
Cd40P27512 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd40P27512 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.53■□□□□ 0.72
Cd40P27512 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd40P27512 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.53■□□□□ 0.72
Cd40P27512 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cd40P27512 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.53■□□□□ 0.72
Cd40P27512 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd40P27512 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd40P27512 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Cd40P27512 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd40P27512 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.52■□□□□ 0.72
Cd40P27512 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.52■□□□□ 0.72
Cd40P27512 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cd40P27512 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.52■□□□□ 0.72
Cd40P27512 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd40P27512 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd40P27512 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Cd40P27512 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd40P27512 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cd40P27512 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd40P27512 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cd40P27512 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.52■□□□□ 0.71
Cd40P27512 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd40P27512 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cd40P27512 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd40P27512 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd40P27512 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd40P27512 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Cd40P27512 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd40P27512 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.51■□□□□ 0.71
Cd40P27512 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd40P27512 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cd40P27512 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cd40P27512 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cd40P27512 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cd40P27512 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cd40P27512 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cd40P27512 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cd40P27512 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cd40P27512 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.49■□□□□ 0.71
Cd40P27512 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.49■□□□□ 0.71
Cd40P27512 Gm5921-201ENSMUST00000075898 882 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms