Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1bP25119 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1bP25119 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1bP25119 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1bP25119 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1bP25119 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20■□□□□ 0.79
Tnfrsf1bP25119 Nsd1-203ENSMUST00000224156 1149 ntBASIC20■□□□□ 0.79
Tnfrsf1bP25119 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1bP25119 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1bP25119 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1bP25119 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1bP25119 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Tnfrsf1bP25119 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.99■□□□□ 0.79
Tnfrsf1bP25119 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfrsf1bP25119 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfrsf1bP25119 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfrsf1bP25119 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.98■□□□□ 0.79
Tnfrsf1bP25119 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.98■□□□□ 0.79
Tnfrsf1bP25119 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfrsf1bP25119 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfrsf1bP25119 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfrsf1bP25119 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf1bP25119 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf1bP25119 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.97■□□□□ 0.79
Tnfrsf1bP25119 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Tnfrsf1bP25119 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf1bP25119 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf1bP25119 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf1bP25119 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Tnfrsf1bP25119 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1bP25119 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1bP25119 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1bP25119 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.96■□□□□ 0.79
Tnfrsf1bP25119 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.96■□□□□ 0.79
Tnfrsf1bP25119 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.96■□□□□ 0.79
Tnfrsf1bP25119 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Tnfrsf1bP25119 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1bP25119 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1bP25119 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1bP25119 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf1bP25119 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf1bP25119 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf1bP25119 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf1bP25119 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf1bP25119 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf1bP25119 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf1bP25119 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf1bP25119 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Tnfrsf1bP25119 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Tnfrsf1bP25119 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf1bP25119 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf1bP25119 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf1bP25119 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf1bP25119 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf1bP25119 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Tnfrsf1bP25119 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf1bP25119 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf1bP25119 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Tnfrsf1bP25119 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.93■□□□□ 0.78
Tnfrsf1bP25119 Gm45444-201ENSMUST00000211394 898 ntBASIC19.93■□□□□ 0.78
Tnfrsf1bP25119 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf1bP25119 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf1bP25119 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Tnfrsf1bP25119 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Tnfrsf1bP25119 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf1bP25119 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Tnfrsf1bP25119 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.92■□□□□ 0.78
Tnfrsf1bP25119 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Tnfrsf1bP25119 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf1bP25119 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf1bP25119 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf1bP25119 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf1bP25119 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf1bP25119 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Tnfrsf1bP25119 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Tnfrsf1bP25119 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf1bP25119 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf1bP25119 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf1bP25119 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf1bP25119 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf1bP25119 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.9■□□□□ 0.78
Tnfrsf1bP25119 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Tnfrsf1bP25119 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf1bP25119 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf1bP25119 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf1bP25119 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Tnfrsf1bP25119 Gm13238-201ENSMUST00000117655 780 ntBASIC19.89■□□□□ 0.77
Tnfrsf1bP25119 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.89■□□□□ 0.77
Tnfrsf1bP25119 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf1bP25119 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf1bP25119 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf1bP25119 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf1bP25119 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf1bP25119 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf1bP25119 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Tnfrsf1bP25119 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf1bP25119 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Tnfrsf1bP25119 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Tnfrsf1bP25119 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf1bP25119 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms