Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cbx3P23198 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cbx3P23198 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cbx3P23198 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cbx3P23198 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Cbx3P23198 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cbx3P23198 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cbx3P23198 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.51■□□□□ 0.71
Cbx3P23198 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cbx3P23198 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cbx3P23198 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cbx3P23198 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cbx3P23198 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cbx3P23198 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cbx3P23198 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cbx3P23198 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cbx3P23198 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cbx3P23198 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cbx3P23198 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.5■□□□□ 0.71
Cbx3P23198 Gm45855-201ENSMUST00000212546 880 ntBASIC19.5■□□□□ 0.71
Cbx3P23198 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cbx3P23198 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cbx3P23198 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cbx3P23198 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.5■□□□□ 0.71
Cbx3P23198 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cbx3P23198 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cbx3P23198 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cbx3P23198 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cbx3P23198 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cbx3P23198 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cbx3P23198 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cbx3P23198 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cbx3P23198 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cbx3P23198 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cbx3P23198 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cbx3P23198 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cbx3P23198 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cbx3P23198 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cbx3P23198 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cbx3P23198 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cbx3P23198 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cbx3P23198 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cbx3P23198 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cbx3P23198 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cbx3P23198 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cbx3P23198 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cbx3P23198 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.46■□□□□ 0.71
Cbx3P23198 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cbx3P23198 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cbx3P23198 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.45■□□□□ 0.7
Cbx3P23198 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cbx3P23198 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Cbx3P23198 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cbx3P23198 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Cbx3P23198 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cbx3P23198 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Cbx3P23198 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cbx3P23198 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.43■□□□□ 0.7
Cbx3P23198 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Cbx3P23198 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx3P23198 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx3P23198 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx3P23198 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx3P23198 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cbx3P23198 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx3P23198 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cbx3P23198 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx3P23198 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx3P23198 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx3P23198 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx3P23198 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx3P23198 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx3P23198 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx3P23198 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx3P23198 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx3P23198 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Cbx3P23198 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cbx3P23198 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx3P23198 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.4■□□□□ 0.7
Cbx3P23198 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.4■□□□□ 0.7
Cbx3P23198 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx3P23198 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx3P23198 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cbx3P23198 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cbx3P23198 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cbx3P23198 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx3P23198 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cbx3P23198 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cbx3P23198 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx3P23198 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx3P23198 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cbx3P23198 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx3P23198 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx3P23198 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx3P23198 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx3P23198 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx3P23198 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx3P23198 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx3P23198 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx3P23198 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 197.7 ms