Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BdnfP21237 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
BdnfP21237 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BdnfP21237 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
BdnfP21237 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BdnfP21237 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BdnfP21237 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BdnfP21237 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BdnfP21237 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.58■□□□□ 0.89
BdnfP21237 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BdnfP21237 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BdnfP21237 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BdnfP21237 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BdnfP21237 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BdnfP21237 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BdnfP21237 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.57■□□□□ 0.88
BdnfP21237 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BdnfP21237 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BdnfP21237 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BdnfP21237 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
BdnfP21237 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BdnfP21237 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BdnfP21237 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BdnfP21237 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BdnfP21237 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.56■□□□□ 0.88
BdnfP21237 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BdnfP21237 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
BdnfP21237 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BdnfP21237 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BdnfP21237 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BdnfP21237 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BdnfP21237 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BdnfP21237 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
BdnfP21237 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BdnfP21237 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BdnfP21237 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BdnfP21237 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BdnfP21237 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BdnfP21237 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BdnfP21237 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.55■□□□□ 0.88
BdnfP21237 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BdnfP21237 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BdnfP21237 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BdnfP21237 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BdnfP21237 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.54■□□□□ 0.88
BdnfP21237 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BdnfP21237 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BdnfP21237 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
BdnfP21237 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BdnfP21237 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BdnfP21237 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BdnfP21237 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BdnfP21237 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.54■□□□□ 0.88
BdnfP21237 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BdnfP21237 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BdnfP21237 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BdnfP21237 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.53■□□□□ 0.88
BdnfP21237 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.53■□□□□ 0.88
BdnfP21237 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BdnfP21237 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.53■□□□□ 0.88
BdnfP21237 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BdnfP21237 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BdnfP21237 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BdnfP21237 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BdnfP21237 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
BdnfP21237 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.52■□□□□ 0.88
BdnfP21237 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.52■□□□□ 0.88
BdnfP21237 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BdnfP21237 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
BdnfP21237 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.51■□□□□ 0.87
BdnfP21237 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
BdnfP21237 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BdnfP21237 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BdnfP21237 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BdnfP21237 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.5■□□□□ 0.87
BdnfP21237 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
BdnfP21237 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BdnfP21237 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.5■□□□□ 0.87
BdnfP21237 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BdnfP21237 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BdnfP21237 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BdnfP21237 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
BdnfP21237 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BdnfP21237 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BdnfP21237 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BdnfP21237 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BdnfP21237 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BdnfP21237 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BdnfP21237 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
BdnfP21237 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BdnfP21237 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.49■□□□□ 0.87
BdnfP21237 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BdnfP21237 Scarna2-201ENSMUST00000157560 414 ntBASIC20.48■□□□□ 0.87
BdnfP21237 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
BdnfP21237 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BdnfP21237 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.47■□□□□ 0.87
BdnfP21237 Gm16437-201ENSMUST00000025669 507 ntBASIC20.47■□□□□ 0.87
BdnfP21237 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BdnfP21237 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BdnfP21237 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms