Protein–RNA interactions for Protein: P08046

Egr1, Early growth response protein 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Egr1P08046 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Egr1P08046 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Egr1P08046 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Egr1P08046 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Egr1P08046 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Egr1P08046 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.52■□□□□ 0.88
Egr1P08046 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Egr1P08046 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.52■□□□□ 0.88
Egr1P08046 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.52■□□□□ 0.88
Egr1P08046 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.52■□□□□ 0.88
Egr1P08046 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Egr1P08046 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Egr1P08046 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Egr1P08046 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Egr1P08046 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Egr1P08046 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Egr1P08046 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.51■□□□□ 0.87
Egr1P08046 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Egr1P08046 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Egr1P08046 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Egr1P08046 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Egr1P08046 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.5■□□□□ 0.87
Egr1P08046 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Egr1P08046 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.5■□□□□ 0.87
Egr1P08046 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Egr1P08046 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Egr1P08046 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Egr1P08046 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Egr1P08046 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Egr1P08046 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Egr1P08046 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Egr1P08046 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.49■□□□□ 0.87
Egr1P08046 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Egr1P08046 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.49■□□□□ 0.87
Egr1P08046 Gm43017-201ENSMUST00000198296 752 ntBASIC20.49■□□□□ 0.87
Egr1P08046 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Egr1P08046 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Egr1P08046 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Egr1P08046 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Egr1P08046 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Egr1P08046 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Egr1P08046 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Egr1P08046 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Egr1P08046 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Egr1P08046 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.47■□□□□ 0.87
Egr1P08046 Gm7291-201ENSMUST00000199147 382 ntBASIC20.47■□□□□ 0.87
Egr1P08046 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.47■□□□□ 0.87
Egr1P08046 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Egr1P08046 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Egr1P08046 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Egr1P08046 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Egr1P08046 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.46■□□□□ 0.87
Egr1P08046 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.46■□□□□ 0.87
Egr1P08046 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
Egr1P08046 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Egr1P08046 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Egr1P08046 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Egr1P08046 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Egr1P08046 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.45■□□□□ 0.86
Egr1P08046 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Egr1P08046 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
Egr1P08046 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Egr1P08046 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Egr1P08046 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Egr1P08046 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Egr1P08046 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Egr1P08046 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.43■□□□□ 0.86
Egr1P08046 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.43■□□□□ 0.86
Egr1P08046 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Egr1P08046 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Egr1P08046 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Egr1P08046 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Egr1P08046 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.42■□□□□ 0.86
Egr1P08046 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.42■□□□□ 0.86
Egr1P08046 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Egr1P08046 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Egr1P08046 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Egr1P08046 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Egr1P08046 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Egr1P08046 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Egr1P08046 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Egr1P08046 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Egr1P08046 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Egr1P08046 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Egr1P08046 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Egr1P08046 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Egr1P08046 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Egr1P08046 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.4■□□□□ 0.86
Egr1P08046 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Egr1P08046 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Egr1P08046 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Egr1P08046 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Egr1P08046 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Egr1P08046 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Egr1P08046 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Egr1P08046 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Egr1P08046 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Egr1P08046 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.39■□□□□ 0.85
Egr1P08046 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.39■□□□□ 0.85
Egr1P08046 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms