Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dnmt3bO88509 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dnmt3bO88509 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dnmt3bO88509 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dnmt3bO88509 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.79■□□□□ 0.92
Dnmt3bO88509 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dnmt3bO88509 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Dnmt3bO88509 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.79■□□□□ 0.92
Dnmt3bO88509 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dnmt3bO88509 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Dnmt3bO88509 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.78■□□□□ 0.92
Dnmt3bO88509 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
Dnmt3bO88509 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dnmt3bO88509 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Dnmt3bO88509 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dnmt3bO88509 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dnmt3bO88509 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dnmt3bO88509 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Dnmt3bO88509 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Dnmt3bO88509 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dnmt3bO88509 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
Dnmt3bO88509 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Dnmt3bO88509 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Dnmt3bO88509 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Dnmt3bO88509 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.76■□□□□ 0.91
Dnmt3bO88509 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dnmt3bO88509 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Dnmt3bO88509 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dnmt3bO88509 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Dnmt3bO88509 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dnmt3bO88509 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.75■□□□□ 0.91
Dnmt3bO88509 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dnmt3bO88509 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dnmt3bO88509 Gm9812-201ENSMUST00000061934 968 ntBASIC20.74■□□□□ 0.91
Dnmt3bO88509 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dnmt3bO88509 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Dnmt3bO88509 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dnmt3bO88509 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dnmt3bO88509 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dnmt3bO88509 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dnmt3bO88509 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dnmt3bO88509 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Dnmt3bO88509 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dnmt3bO88509 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Dnmt3bO88509 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Dnmt3bO88509 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dnmt3bO88509 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dnmt3bO88509 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dnmt3bO88509 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.71■□□□□ 0.91
Dnmt3bO88509 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.71■□□□□ 0.91
Dnmt3bO88509 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dnmt3bO88509 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dnmt3bO88509 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dnmt3bO88509 Gm22567-201ENSMUST00000175542 342 ntBASIC20.71■□□□□ 0.91
Dnmt3bO88509 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.71■□□□□ 0.91
Dnmt3bO88509 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dnmt3bO88509 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.71■□□□□ 0.91
Dnmt3bO88509 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.7■□□□□ 0.91
Dnmt3bO88509 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnmt3bO88509 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnmt3bO88509 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnmt3bO88509 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Dnmt3bO88509 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.7■□□□□ 0.9
Dnmt3bO88509 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnmt3bO88509 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Dnmt3bO88509 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnmt3bO88509 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3bO88509 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3bO88509 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3bO88509 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Dnmt3bO88509 Gm5812-201ENSMUST00000061073 957 ntBASIC20.69■□□□□ 0.9
Dnmt3bO88509 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.69■□□□□ 0.9
Dnmt3bO88509 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3bO88509 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3bO88509 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3bO88509 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Dnmt3bO88509 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3bO88509 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.68■□□□□ 0.9
Dnmt3bO88509 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3bO88509 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.68■□□□□ 0.9
Dnmt3bO88509 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3bO88509 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3bO88509 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Dnmt3bO88509 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3bO88509 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.67■□□□□ 0.9
Dnmt3bO88509 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3bO88509 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3bO88509 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.67■□□□□ 0.9
Dnmt3bO88509 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3bO88509 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3bO88509 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3bO88509 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.66■□□□□ 0.9
Dnmt3bO88509 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Dnmt3bO88509 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3bO88509 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3bO88509 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3bO88509 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3bO88509 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3bO88509 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3bO88509 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms