Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.75■□□□□ 0.91
Tgfbr3O88393 Gm21956-201ENSMUST00000179946 522 ntBASIC20.75■□□□□ 0.91
Tgfbr3O88393 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tgfbr3O88393 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tgfbr3O88393 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tgfbr3O88393 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tgfbr3O88393 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tgfbr3O88393 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tgfbr3O88393 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tgfbr3O88393 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tgfbr3O88393 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.73■□□□□ 0.91
Tgfbr3O88393 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tgfbr3O88393 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.73■□□□□ 0.91
Tgfbr3O88393 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tgfbr3O88393 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Tgfbr3O88393 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tgfbr3O88393 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tgfbr3O88393 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tgfbr3O88393 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tgfbr3O88393 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tgfbr3O88393 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tgfbr3O88393 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tgfbr3O88393 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.71■□□□□ 0.91
Tgfbr3O88393 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tgfbr3O88393 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tgfbr3O88393 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tgfbr3O88393 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.7■□□□□ 0.9
Tgfbr3O88393 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tgfbr3O88393 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tgfbr3O88393 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tgfbr3O88393 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tgfbr3O88393 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tgfbr3O88393 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tgfbr3O88393 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tgfbr3O88393 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tgfbr3O88393 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tgfbr3O88393 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tgfbr3O88393 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tgfbr3O88393 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tgfbr3O88393 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tgfbr3O88393 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Tgfbr3O88393 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tgfbr3O88393 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.68■□□□□ 0.9
Tgfbr3O88393 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tgfbr3O88393 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tgfbr3O88393 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tgfbr3O88393 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tgfbr3O88393 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tgfbr3O88393 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tgfbr3O88393 Gm10399-202ENSMUST00000202768 748 ntBASIC20.67■□□□□ 0.9
Tgfbr3O88393 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.67■□□□□ 0.9
Tgfbr3O88393 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tgfbr3O88393 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tgfbr3O88393 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tgfbr3O88393 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.67■□□□□ 0.9
Tgfbr3O88393 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.66■□□□□ 0.9
Tgfbr3O88393 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.66■□□□□ 0.9
Tgfbr3O88393 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Tgfbr3O88393 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tgfbr3O88393 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tgfbr3O88393 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tgfbr3O88393 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tgfbr3O88393 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tgfbr3O88393 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tgfbr3O88393 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.65■□□□□ 0.9
Tgfbr3O88393 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tgfbr3O88393 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.64■□□□□ 0.9
Tgfbr3O88393 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tgfbr3O88393 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tgfbr3O88393 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Tgfbr3O88393 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tgfbr3O88393 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.64■□□□□ 0.89
Tgfbr3O88393 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tgfbr3O88393 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Tgfbr3O88393 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.64■□□□□ 0.89
Tgfbr3O88393 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tgfbr3O88393 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tgfbr3O88393 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tgfbr3O88393 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tgfbr3O88393 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.62■□□□□ 0.89
Tgfbr3O88393 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tgfbr3O88393 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tgfbr3O88393 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tgfbr3O88393 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tgfbr3O88393 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Tgfbr3O88393 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tgfbr3O88393 Gm12922-201ENSMUST00000120626 809 ntBASIC20.61■□□□□ 0.89
Tgfbr3O88393 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.61■□□□□ 0.89
Tgfbr3O88393 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tgfbr3O88393 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tgfbr3O88393 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.6■□□□□ 0.89
Tgfbr3O88393 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tgfbr3O88393 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tgfbr3O88393 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tgfbr3O88393 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Tgfbr3O88393 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Tgfbr3O88393 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tgfbr3O88393 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tgfbr3O88393 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tgfbr3O88393 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms