Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx3O70137 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx3O70137 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx3O70137 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx3O70137 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx3O70137 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Alx3O70137 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.53■□□□□ 0.72
Alx3O70137 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx3O70137 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx3O70137 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx3O70137 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx3O70137 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Alx3O70137 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Alx3O70137 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx3O70137 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx3O70137 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx3O70137 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.52■□□□□ 0.72
Alx3O70137 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx3O70137 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Alx3O70137 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Alx3O70137 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Alx3O70137 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Alx3O70137 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Alx3O70137 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Alx3O70137 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Alx3O70137 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx3O70137 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.5■□□□□ 0.71
Alx3O70137 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx3O70137 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Alx3O70137 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx3O70137 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Alx3O70137 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Alx3O70137 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx3O70137 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx3O70137 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Alx3O70137 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx3O70137 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Alx3O70137 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx3O70137 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.48■□□□□ 0.71
Alx3O70137 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx3O70137 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.48■□□□□ 0.71
Alx3O70137 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx3O70137 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx3O70137 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Alx3O70137 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Alx3O70137 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx3O70137 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx3O70137 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx3O70137 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.47■□□□□ 0.71
Alx3O70137 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx3O70137 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Alx3O70137 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.47■□□□□ 0.71
Alx3O70137 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx3O70137 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Alx3O70137 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Alx3O70137 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.46■□□□□ 0.71
Alx3O70137 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.46■□□□□ 0.71
Alx3O70137 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx3O70137 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx3O70137 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx3O70137 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Alx3O70137 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx3O70137 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx3O70137 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx3O70137 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx3O70137 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx3O70137 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx3O70137 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx3O70137 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx3O70137 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.43■□□□□ 0.7
Alx3O70137 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx3O70137 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Alx3O70137 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Alx3O70137 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx3O70137 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx3O70137 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx3O70137 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx3O70137 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx3O70137 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Alx3O70137 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Alx3O70137 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.41■□□□□ 0.7
Alx3O70137 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.41■□□□□ 0.7
Alx3O70137 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Alx3O70137 Gm9806-201ENSMUST00000051080 552 ntBASIC19.41■□□□□ 0.7
Alx3O70137 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx3O70137 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Alx3O70137 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.41■□□□□ 0.7
Alx3O70137 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx3O70137 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx3O70137 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.4■□□□□ 0.7
Alx3O70137 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx3O70137 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx3O70137 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.4■□□□□ 0.7
Alx3O70137 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Alx3O70137 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx3O70137 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Alx3O70137 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx3O70137 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alx3O70137 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Alx3O70137 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms