Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm7417-201ENSMUST00000192950 473 ntBASIC23.79■■□□□ 1.4
Sptlc1O35704 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sptlc1O35704 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.79■■□□□ 1.4
Sptlc1O35704 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sptlc1O35704 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sptlc1O35704 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sptlc1O35704 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sptlc1O35704 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sptlc1O35704 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sptlc1O35704 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.78■■□□□ 1.4
Sptlc1O35704 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.78■■□□□ 1.4
Sptlc1O35704 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sptlc1O35704 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sptlc1O35704 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sptlc1O35704 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sptlc1O35704 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sptlc1O35704 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.77■■□□□ 1.4
Sptlc1O35704 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sptlc1O35704 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sptlc1O35704 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sptlc1O35704 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sptlc1O35704 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.76■■□□□ 1.39
Sptlc1O35704 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sptlc1O35704 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.76■■□□□ 1.39
Sptlc1O35704 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sptlc1O35704 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sptlc1O35704 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Sptlc1O35704 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Sptlc1O35704 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sptlc1O35704 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.75■■□□□ 1.39
Sptlc1O35704 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Sptlc1O35704 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Sptlc1O35704 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sptlc1O35704 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Sptlc1O35704 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sptlc1O35704 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.73■■□□□ 1.39
Sptlc1O35704 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.73■■□□□ 1.39
Sptlc1O35704 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Sptlc1O35704 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.73■■□□□ 1.39
Sptlc1O35704 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.73■■□□□ 1.39
Sptlc1O35704 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Sptlc1O35704 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sptlc1O35704 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sptlc1O35704 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Sptlc1O35704 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sptlc1O35704 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.72■■□□□ 1.39
Sptlc1O35704 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.72■■□□□ 1.39
Sptlc1O35704 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sptlc1O35704 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Sptlc1O35704 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sptlc1O35704 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.71■■□□□ 1.39
Sptlc1O35704 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sptlc1O35704 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sptlc1O35704 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Sptlc1O35704 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sptlc1O35704 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Sptlc1O35704 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Sptlc1O35704 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sptlc1O35704 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.7■■□□□ 1.38
Sptlc1O35704 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.7■■□□□ 1.38
Sptlc1O35704 Gm40881-201ENSMUST00000223397 166 ntBASIC23.7■■□□□ 1.38
Sptlc1O35704 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sptlc1O35704 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sptlc1O35704 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sptlc1O35704 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.69■■□□□ 1.38
Sptlc1O35704 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Sptlc1O35704 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.69■■□□□ 1.38
Sptlc1O35704 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sptlc1O35704 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sptlc1O35704 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.68■■□□□ 1.38
Sptlc1O35704 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sptlc1O35704 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Sptlc1O35704 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sptlc1O35704 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sptlc1O35704 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.67■■□□□ 1.38
Sptlc1O35704 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.67■■□□□ 1.38
Sptlc1O35704 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sptlc1O35704 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Sptlc1O35704 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sptlc1O35704 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sptlc1O35704 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sptlc1O35704 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sptlc1O35704 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sptlc1O35704 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Sptlc1O35704 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Sptlc1O35704 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.66■■□□□ 1.38
Sptlc1O35704 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Sptlc1O35704 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sptlc1O35704 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Sptlc1O35704 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.65■■□□□ 1.38
Sptlc1O35704 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sptlc1O35704 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sptlc1O35704 Gm22238-201ENSMUST00000175222 88 ntBASIC23.64■■□□□ 1.37
Sptlc1O35704 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Sptlc1O35704 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Sptlc1O35704 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sptlc1O35704 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sptlc1O35704 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.64■■□□□ 1.37
Sptlc1O35704 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sptlc1O35704 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms