Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clk3O35492 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clk3O35492 Gm44428-201ENSMUST00000204474 874 ntBASIC20.42■□□□□ 0.86
Clk3O35492 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clk3O35492 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clk3O35492 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clk3O35492 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clk3O35492 Gm11175-201ENSMUST00000116172 543 ntBASIC20.41■□□□□ 0.86
Clk3O35492 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Clk3O35492 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clk3O35492 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.4■□□□□ 0.86
Clk3O35492 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clk3O35492 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clk3O35492 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clk3O35492 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clk3O35492 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clk3O35492 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clk3O35492 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clk3O35492 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clk3O35492 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.39■□□□□ 0.85
Clk3O35492 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.39■□□□□ 0.85
Clk3O35492 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clk3O35492 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clk3O35492 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clk3O35492 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clk3O35492 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.38■□□□□ 0.85
Clk3O35492 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.38■□□□□ 0.85
Clk3O35492 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.38■□□□□ 0.85
Clk3O35492 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clk3O35492 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clk3O35492 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.38■□□□□ 0.85
Clk3O35492 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Clk3O35492 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Clk3O35492 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.37■□□□□ 0.85
Clk3O35492 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.37■□□□□ 0.85
Clk3O35492 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clk3O35492 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Clk3O35492 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Clk3O35492 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Clk3O35492 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clk3O35492 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Clk3O35492 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk3O35492 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk3O35492 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.35■□□□□ 0.85
Clk3O35492 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk3O35492 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk3O35492 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clk3O35492 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clk3O35492 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clk3O35492 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clk3O35492 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Clk3O35492 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clk3O35492 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clk3O35492 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clk3O35492 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Clk3O35492 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clk3O35492 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Clk3O35492 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clk3O35492 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Clk3O35492 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clk3O35492 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Clk3O35492 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Clk3O35492 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk3O35492 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.31■□□□□ 0.84
Clk3O35492 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.31■□□□□ 0.84
Clk3O35492 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk3O35492 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk3O35492 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk3O35492 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clk3O35492 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Clk3O35492 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.3■□□□□ 0.84
Clk3O35492 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Clk3O35492 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clk3O35492 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Clk3O35492 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.3■□□□□ 0.84
Clk3O35492 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Clk3O35492 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clk3O35492 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Clk3O35492 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Clk3O35492 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Clk3O35492 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clk3O35492 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clk3O35492 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.29■□□□□ 0.84
Clk3O35492 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.29■□□□□ 0.84
Clk3O35492 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clk3O35492 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clk3O35492 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.28■□□□□ 0.84
Clk3O35492 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clk3O35492 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Clk3O35492 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk3O35492 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk3O35492 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.27■□□□□ 0.84
Clk3O35492 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk3O35492 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clk3O35492 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clk3O35492 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Clk3O35492 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Clk3O35492 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clk3O35492 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clk3O35492 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms