Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
B020004C17RikJ3QP07 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
B020004C17RikJ3QP07 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
B020004C17RikJ3QP07 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
B020004C17RikJ3QP07 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
B020004C17RikJ3QP07 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
B020004C17RikJ3QP07 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
B020004C17RikJ3QP07 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
B020004C17RikJ3QP07 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
B020004C17RikJ3QP07 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.68■■□□□ 1.54
B020004C17RikJ3QP07 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
B020004C17RikJ3QP07 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
B020004C17RikJ3QP07 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
B020004C17RikJ3QP07 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
B020004C17RikJ3QP07 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
B020004C17RikJ3QP07 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.67■■□□□ 1.54
B020004C17RikJ3QP07 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
B020004C17RikJ3QP07 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
B020004C17RikJ3QP07 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.67■■□□□ 1.54
B020004C17RikJ3QP07 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
B020004C17RikJ3QP07 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
B020004C17RikJ3QP07 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.66■■□□□ 1.54
B020004C17RikJ3QP07 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.66■■□□□ 1.54
B020004C17RikJ3QP07 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
B020004C17RikJ3QP07 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
B020004C17RikJ3QP07 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
B020004C17RikJ3QP07 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
B020004C17RikJ3QP07 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
B020004C17RikJ3QP07 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.64■■□□□ 1.54
B020004C17RikJ3QP07 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.64■■□□□ 1.53
B020004C17RikJ3QP07 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
B020004C17RikJ3QP07 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.63■■□□□ 1.53
B020004C17RikJ3QP07 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
B020004C17RikJ3QP07 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
B020004C17RikJ3QP07 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
B020004C17RikJ3QP07 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
B020004C17RikJ3QP07 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
B020004C17RikJ3QP07 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
B020004C17RikJ3QP07 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
B020004C17RikJ3QP07 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.62■■□□□ 1.53
B020004C17RikJ3QP07 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.62■■□□□ 1.53
B020004C17RikJ3QP07 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.62■■□□□ 1.53
B020004C17RikJ3QP07 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
B020004C17RikJ3QP07 Gm12821-201ENSMUST00000120022 600 ntBASIC24.61■■□□□ 1.53
B020004C17RikJ3QP07 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
B020004C17RikJ3QP07 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
B020004C17RikJ3QP07 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC24.61■■□□□ 1.53
B020004C17RikJ3QP07 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
B020004C17RikJ3QP07 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
B020004C17RikJ3QP07 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
B020004C17RikJ3QP07 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
B020004C17RikJ3QP07 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.61■■□□□ 1.53
B020004C17RikJ3QP07 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.6■■□□□ 1.53
B020004C17RikJ3QP07 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.6■■□□□ 1.53
B020004C17RikJ3QP07 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
B020004C17RikJ3QP07 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
B020004C17RikJ3QP07 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.59■■□□□ 1.53
B020004C17RikJ3QP07 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
B020004C17RikJ3QP07 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
B020004C17RikJ3QP07 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
B020004C17RikJ3QP07 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
B020004C17RikJ3QP07 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
B020004C17RikJ3QP07 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.58■■□□□ 1.53
B020004C17RikJ3QP07 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
B020004C17RikJ3QP07 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
B020004C17RikJ3QP07 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
B020004C17RikJ3QP07 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
B020004C17RikJ3QP07 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24.57■■□□□ 1.52
B020004C17RikJ3QP07 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
B020004C17RikJ3QP07 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
B020004C17RikJ3QP07 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.56■■□□□ 1.52
B020004C17RikJ3QP07 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
B020004C17RikJ3QP07 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
B020004C17RikJ3QP07 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
B020004C17RikJ3QP07 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC24.55■■□□□ 1.52
B020004C17RikJ3QP07 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
B020004C17RikJ3QP07 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
B020004C17RikJ3QP07 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.54■■□□□ 1.52
B020004C17RikJ3QP07 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
B020004C17RikJ3QP07 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
B020004C17RikJ3QP07 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
B020004C17RikJ3QP07 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
B020004C17RikJ3QP07 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
B020004C17RikJ3QP07 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.53■■□□□ 1.52
B020004C17RikJ3QP07 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.53■■□□□ 1.52
B020004C17RikJ3QP07 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC24.53■■□□□ 1.52
B020004C17RikJ3QP07 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
B020004C17RikJ3QP07 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
B020004C17RikJ3QP07 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.53■■□□□ 1.52
B020004C17RikJ3QP07 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
B020004C17RikJ3QP07 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
B020004C17RikJ3QP07 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.52■■□□□ 1.52
B020004C17RikJ3QP07 Golgb1-201ENSMUST00000023534 498 ntBASIC24.52■■□□□ 1.52
B020004C17RikJ3QP07 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
B020004C17RikJ3QP07 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
B020004C17RikJ3QP07 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
B020004C17RikJ3QP07 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
B020004C17RikJ3QP07 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
B020004C17RikJ3QP07 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.51■■□□□ 1.51
B020004C17RikJ3QP07 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms