Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc149F6V035 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.02■■□□□ 1.12
Ccdc149F6V035 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.02■■□□□ 1.12
Ccdc149F6V035 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc149F6V035 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.02■■□□□ 1.12
Ccdc149F6V035 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc149F6V035 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ccdc149F6V035 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc149F6V035 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc149F6V035 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.01■■□□□ 1.11
Ccdc149F6V035 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Ccdc149F6V035 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc149F6V035 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.01■■□□□ 1.11
Ccdc149F6V035 Gm11847-201ENSMUST00000125165 1119 ntBASIC22■■□□□ 1.11
Ccdc149F6V035 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc149F6V035 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22■■□□□ 1.11
Ccdc149F6V035 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22■■□□□ 1.11
Ccdc149F6V035 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
Ccdc149F6V035 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ccdc149F6V035 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc149F6V035 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc149F6V035 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc149F6V035 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc149F6V035 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.99■■□□□ 1.11
Ccdc149F6V035 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.99■■□□□ 1.11
Ccdc149F6V035 Gm7417-201ENSMUST00000192950 473 ntBASIC21.99■■□□□ 1.11
Ccdc149F6V035 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.99■■□□□ 1.11
Ccdc149F6V035 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc149F6V035 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.98■■□□□ 1.11
Ccdc149F6V035 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc149F6V035 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc149F6V035 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc149F6V035 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.97■■□□□ 1.11
Ccdc149F6V035 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc149F6V035 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.97■■□□□ 1.11
Ccdc149F6V035 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc149F6V035 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc149F6V035 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc149F6V035 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc149F6V035 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Ccdc149F6V035 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc149F6V035 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.96■■□□□ 1.11
Ccdc149F6V035 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc149F6V035 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc149F6V035 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc149F6V035 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc149F6V035 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc149F6V035 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc149F6V035 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc149F6V035 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc149F6V035 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc149F6V035 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc149F6V035 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc149F6V035 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.94■■□□□ 1.1
Ccdc149F6V035 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc149F6V035 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.94■■□□□ 1.1
Ccdc149F6V035 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.94■■□□□ 1.1
Ccdc149F6V035 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc149F6V035 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc149F6V035 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.93■■□□□ 1.1
Ccdc149F6V035 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc149F6V035 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc149F6V035 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc149F6V035 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc149F6V035 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc149F6V035 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc149F6V035 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.92■■□□□ 1.1
Ccdc149F6V035 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc149F6V035 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc149F6V035 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc149F6V035 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.91■■□□□ 1.1
Ccdc149F6V035 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ccdc149F6V035 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc149F6V035 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc149F6V035 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc149F6V035 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.9■■□□□ 1.1
Ccdc149F6V035 Gm40881-201ENSMUST00000223397 166 ntBASIC21.9■■□□□ 1.1
Ccdc149F6V035 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
Ccdc149F6V035 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Ccdc149F6V035 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ccdc149F6V035 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc149F6V035 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.89■■□□□ 1.09
Ccdc149F6V035 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc149F6V035 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc149F6V035 Gm15039-201ENSMUST00000118914 875 ntBASIC21.88■■□□□ 1.09
Ccdc149F6V035 Gm10399-202ENSMUST00000202768 748 ntBASIC21.88■■□□□ 1.09
Ccdc149F6V035 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.88■■□□□ 1.09
Ccdc149F6V035 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc149F6V035 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc149F6V035 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc149F6V035 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.87■■□□□ 1.09
Ccdc149F6V035 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.87■■□□□ 1.09
Ccdc149F6V035 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc149F6V035 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Ccdc149F6V035 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc149F6V035 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc149F6V035 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.87■■□□□ 1.09
Ccdc149F6V035 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc149F6V035 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc149F6V035 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms