Protein–RNA interactions for Protein: F6U8B9

Gm17555, Predicted gene, 17555, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17555F6U8B9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Gm17555F6U8B9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm17555F6U8B9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm17555F6U8B9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17555F6U8B9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17555F6U8B9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17555F6U8B9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Gm17555F6U8B9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Gm17555F6U8B9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17555F6U8B9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17555F6U8B9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
Gm17555F6U8B9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17555F6U8B9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17555F6U8B9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm17555F6U8B9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gm17555F6U8B9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.78■□□□□ 0.76
Gm17555F6U8B9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm17555F6U8B9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.77■□□□□ 0.76
Gm17555F6U8B9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm17555F6U8B9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm17555F6U8B9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm17555F6U8B9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
Gm17555F6U8B9 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.77■□□□□ 0.75
Gm17555F6U8B9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Gm17555F6U8B9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm17555F6U8B9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm17555F6U8B9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm17555F6U8B9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.76■□□□□ 0.75
Gm17555F6U8B9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.75■□□□□ 0.75
Gm17555F6U8B9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.75■□□□□ 0.75
Gm17555F6U8B9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm17555F6U8B9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm17555F6U8B9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm17555F6U8B9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm17555F6U8B9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm17555F6U8B9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17555F6U8B9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17555F6U8B9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17555F6U8B9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gm17555F6U8B9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Gm17555F6U8B9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm17555F6U8B9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17555F6U8B9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17555F6U8B9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17555F6U8B9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17555F6U8B9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17555F6U8B9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17555F6U8B9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17555F6U8B9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17555F6U8B9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm17555F6U8B9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17555F6U8B9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gm17555F6U8B9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17555F6U8B9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Gm17555F6U8B9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Gm17555F6U8B9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.72■□□□□ 0.75
Gm17555F6U8B9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17555F6U8B9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17555F6U8B9 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.72■□□□□ 0.75
Gm17555F6U8B9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17555F6U8B9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17555F6U8B9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17555F6U8B9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm17555F6U8B9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.72■□□□□ 0.75
Gm17555F6U8B9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm17555F6U8B9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm17555F6U8B9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17555F6U8B9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17555F6U8B9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17555F6U8B9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm17555F6U8B9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Gm17555F6U8B9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.7■□□□□ 0.74
Gm17555F6U8B9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm17555F6U8B9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17555F6U8B9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17555F6U8B9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm17555F6U8B9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Gm17555F6U8B9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gm17555F6U8B9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gm17555F6U8B9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm17555F6U8B9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm17555F6U8B9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Gm17555F6U8B9 Gm9806-201ENSMUST00000051080 552 ntBASIC19.69■□□□□ 0.74
Gm17555F6U8B9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gm17555F6U8B9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm17555F6U8B9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17555F6U8B9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17555F6U8B9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17555F6U8B9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17555F6U8B9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17555F6U8B9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.68■□□□□ 0.74
Gm17555F6U8B9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm17555F6U8B9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17555F6U8B9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Gm17555F6U8B9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17555F6U8B9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17555F6U8B9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm17555F6U8B9 Gm11175-201ENSMUST00000116172 543 ntBASIC19.67■□□□□ 0.74
Gm17555F6U8B9 Scarna2-201ENSMUST00000157560 414 ntBASIC19.67■□□□□ 0.74
Gm17555F6U8B9 Mir6538-201ENSMUST00000183713 110 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms