Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.86■■□□□ 1.41
R3hdm1E9Q9Q2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
R3hdm1E9Q9Q2 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.85■■□□□ 1.41
R3hdm1E9Q9Q2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.85■■□□□ 1.41
R3hdm1E9Q9Q2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
R3hdm1E9Q9Q2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
R3hdm1E9Q9Q2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
R3hdm1E9Q9Q2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
R3hdm1E9Q9Q2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
R3hdm1E9Q9Q2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
R3hdm1E9Q9Q2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
R3hdm1E9Q9Q2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
R3hdm1E9Q9Q2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
R3hdm1E9Q9Q2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
R3hdm1E9Q9Q2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
R3hdm1E9Q9Q2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
R3hdm1E9Q9Q2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
R3hdm1E9Q9Q2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
R3hdm1E9Q9Q2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
R3hdm1E9Q9Q2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
R3hdm1E9Q9Q2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
R3hdm1E9Q9Q2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.82■■□□□ 1.4
R3hdm1E9Q9Q2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.82■■□□□ 1.4
R3hdm1E9Q9Q2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
R3hdm1E9Q9Q2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
R3hdm1E9Q9Q2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
R3hdm1E9Q9Q2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
R3hdm1E9Q9Q2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
R3hdm1E9Q9Q2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.81■■□□□ 1.4
R3hdm1E9Q9Q2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
R3hdm1E9Q9Q2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
R3hdm1E9Q9Q2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
R3hdm1E9Q9Q2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
R3hdm1E9Q9Q2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
R3hdm1E9Q9Q2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
R3hdm1E9Q9Q2 Gm22238-201ENSMUST00000175222 88 ntBASIC23.8■■□□□ 1.4
R3hdm1E9Q9Q2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
R3hdm1E9Q9Q2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
R3hdm1E9Q9Q2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
R3hdm1E9Q9Q2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
R3hdm1E9Q9Q2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.79■■□□□ 1.4
R3hdm1E9Q9Q2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
R3hdm1E9Q9Q2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.79■■□□□ 1.4
R3hdm1E9Q9Q2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
R3hdm1E9Q9Q2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.79■■□□□ 1.4
R3hdm1E9Q9Q2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
R3hdm1E9Q9Q2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
R3hdm1E9Q9Q2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
R3hdm1E9Q9Q2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
R3hdm1E9Q9Q2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
R3hdm1E9Q9Q2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
R3hdm1E9Q9Q2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
R3hdm1E9Q9Q2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
R3hdm1E9Q9Q2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.77■■□□□ 1.4
R3hdm1E9Q9Q2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3hdm1E9Q9Q2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
R3hdm1E9Q9Q2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
R3hdm1E9Q9Q2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
R3hdm1E9Q9Q2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm1E9Q9Q2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm1E9Q9Q2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm1E9Q9Q2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm1E9Q9Q2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm1E9Q9Q2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm1E9Q9Q2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm1E9Q9Q2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm1E9Q9Q2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm1E9Q9Q2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm1E9Q9Q2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
R3hdm1E9Q9Q2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
R3hdm1E9Q9Q2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.74■■□□□ 1.39
R3hdm1E9Q9Q2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.74■■□□□ 1.39
R3hdm1E9Q9Q2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.74■■□□□ 1.39
R3hdm1E9Q9Q2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.74■■□□□ 1.39
R3hdm1E9Q9Q2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
R3hdm1E9Q9Q2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
R3hdm1E9Q9Q2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.74■■□□□ 1.39
R3hdm1E9Q9Q2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
R3hdm1E9Q9Q2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
R3hdm1E9Q9Q2 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.73■■□□□ 1.39
R3hdm1E9Q9Q2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.73■■□□□ 1.39
R3hdm1E9Q9Q2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
R3hdm1E9Q9Q2 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.72■■□□□ 1.39
R3hdm1E9Q9Q2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
R3hdm1E9Q9Q2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
R3hdm1E9Q9Q2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
R3hdm1E9Q9Q2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
R3hdm1E9Q9Q2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
R3hdm1E9Q9Q2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
R3hdm1E9Q9Q2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
R3hdm1E9Q9Q2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.71■■□□□ 1.39
R3hdm1E9Q9Q2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.71■■□□□ 1.39
R3hdm1E9Q9Q2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
R3hdm1E9Q9Q2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
R3hdm1E9Q9Q2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
R3hdm1E9Q9Q2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
R3hdm1E9Q9Q2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.7■■□□□ 1.38
R3hdm1E9Q9Q2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.7■■□□□ 1.38
R3hdm1E9Q9Q2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
R3hdm1E9Q9Q2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms