Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank1D3YZU1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank1D3YZU1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shank1D3YZU1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shank1D3YZU1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shank1D3YZU1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shank1D3YZU1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.43■□□□□ 0.7
Shank1D3YZU1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.43■□□□□ 0.7
Shank1D3YZU1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank1D3YZU1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Shank1D3YZU1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.42■□□□□ 0.7
Shank1D3YZU1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shank1D3YZU1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Shank1D3YZU1 Golgb1-201ENSMUST00000023534 498 ntBASIC19.42■□□□□ 0.7
Shank1D3YZU1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shank1D3YZU1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Shank1D3YZU1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Shank1D3YZU1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shank1D3YZU1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Shank1D3YZU1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shank1D3YZU1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Shank1D3YZU1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shank1D3YZU1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shank1D3YZU1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shank1D3YZU1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank1D3YZU1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank1D3YZU1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shank1D3YZU1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shank1D3YZU1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Shank1D3YZU1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Shank1D3YZU1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank1D3YZU1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank1D3YZU1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank1D3YZU1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank1D3YZU1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank1D3YZU1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Shank1D3YZU1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank1D3YZU1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank1D3YZU1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Shank1D3YZU1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shank1D3YZU1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shank1D3YZU1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shank1D3YZU1 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.38■□□□□ 0.69
Shank1D3YZU1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.38■□□□□ 0.69
Shank1D3YZU1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Shank1D3YZU1 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.38■□□□□ 0.69
Shank1D3YZU1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Shank1D3YZU1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shank1D3YZU1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shank1D3YZU1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shank1D3YZU1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shank1D3YZU1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Shank1D3YZU1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shank1D3YZU1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Shank1D3YZU1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shank1D3YZU1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.36■□□□□ 0.69
Shank1D3YZU1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shank1D3YZU1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shank1D3YZU1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Shank1D3YZU1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Shank1D3YZU1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank1D3YZU1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank1D3YZU1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank1D3YZU1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank1D3YZU1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank1D3YZU1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Shank1D3YZU1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank1D3YZU1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shank1D3YZU1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank1D3YZU1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank1D3YZU1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank1D3YZU1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Shank1D3YZU1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Shank1D3YZU1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.33■□□□□ 0.69
Shank1D3YZU1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shank1D3YZU1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shank1D3YZU1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shank1D3YZU1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.33■□□□□ 0.68
Shank1D3YZU1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shank1D3YZU1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Shank1D3YZU1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shank1D3YZU1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shank1D3YZU1 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.33■□□□□ 0.68
Shank1D3YZU1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shank1D3YZU1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shank1D3YZU1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shank1D3YZU1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shank1D3YZU1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shank1D3YZU1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Shank1D3YZU1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank1D3YZU1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shank1D3YZU1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.31■□□□□ 0.68
Shank1D3YZU1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shank1D3YZU1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shank1D3YZU1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shank1D3YZU1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank1D3YZU1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shank1D3YZU1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.3■□□□□ 0.68
Shank1D3YZU1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Shank1D3YZU1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms