Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Hist1h2acC0HKE2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hist1h2acC0HKE2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.71■□□□□ 0.75
Hist1h2acC0HKE2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hist1h2acC0HKE2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hist1h2acC0HKE2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.71■□□□□ 0.75
Hist1h2acC0HKE2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hist1h2acC0HKE2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hist1h2acC0HKE2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Hist1h2acC0HKE2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hist1h2acC0HKE2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hist1h2acC0HKE2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hist1h2acC0HKE2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Hist1h2acC0HKE2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hist1h2acC0HKE2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Hist1h2acC0HKE2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hist1h2acC0HKE2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hist1h2acC0HKE2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hist1h2acC0HKE2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hist1h2acC0HKE2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hist1h2acC0HKE2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hist1h2acC0HKE2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hist1h2acC0HKE2 Gm22567-201ENSMUST00000175542 342 ntBASIC19.67■□□□□ 0.74
Hist1h2acC0HKE2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Hist1h2acC0HKE2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.67■□□□□ 0.74
Hist1h2acC0HKE2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hist1h2acC0HKE2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hist1h2acC0HKE2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hist1h2acC0HKE2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.66■□□□□ 0.74
Hist1h2acC0HKE2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hist1h2acC0HKE2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h2acC0HKE2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h2acC0HKE2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h2acC0HKE2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Hist1h2acC0HKE2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.65■□□□□ 0.74
Hist1h2acC0HKE2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h2acC0HKE2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h2acC0HKE2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h2acC0HKE2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Hist1h2acC0HKE2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hist1h2acC0HKE2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hist1h2acC0HKE2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hist1h2acC0HKE2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.64■□□□□ 0.73
Hist1h2acC0HKE2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hist1h2acC0HKE2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.64■□□□□ 0.73
Hist1h2acC0HKE2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hist1h2acC0HKE2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hist1h2acC0HKE2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hist1h2acC0HKE2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hist1h2acC0HKE2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hist1h2acC0HKE2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hist1h2acC0HKE2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hist1h2acC0HKE2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hist1h2acC0HKE2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hist1h2acC0HKE2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hist1h2acC0HKE2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hist1h2acC0HKE2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h2acC0HKE2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h2acC0HKE2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h2acC0HKE2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h2acC0HKE2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h2acC0HKE2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h2acC0HKE2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h2acC0HKE2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hist1h2acC0HKE2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h2acC0HKE2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h2acC0HKE2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h2acC0HKE2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h2acC0HKE2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Hist1h2acC0HKE2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h2acC0HKE2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hist1h2acC0HKE2 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.59■□□□□ 0.73
Hist1h2acC0HKE2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hist1h2acC0HKE2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hist1h2acC0HKE2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hist1h2acC0HKE2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hist1h2acC0HKE2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hist1h2acC0HKE2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hist1h2acC0HKE2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hist1h2acC0HKE2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hist1h2acC0HKE2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hist1h2acC0HKE2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h2acC0HKE2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h2acC0HKE2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h2acC0HKE2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.57■□□□□ 0.72
Hist1h2acC0HKE2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h2acC0HKE2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h2acC0HKE2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h2acC0HKE2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h2acC0HKE2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h2acC0HKE2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h2acC0HKE2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h2acC0HKE2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hist1h2acC0HKE2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h2acC0HKE2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h2acC0HKE2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hist1h2acC0HKE2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hist1h2acC0HKE2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hist1h2acC0HKE2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hist1h2acC0HKE2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms