Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.18□□□□□ -0.14
Igkv1-88A0A140T8N1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.18□□□□□ -0.14
Igkv1-88A0A140T8N1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.18□□□□□ -0.14
Igkv1-88A0A140T8N1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv1-88A0A140T8N1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv1-88A0A140T8N1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv1-88A0A140T8N1 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.18□□□□□ -0.14
Igkv1-88A0A140T8N1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv1-88A0A140T8N1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC14.18□□□□□ -0.14
Igkv1-88A0A140T8N1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv1-88A0A140T8N1 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.17□□□□□ -0.14
Igkv1-88A0A140T8N1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv1-88A0A140T8N1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.17□□□□□ -0.14
Igkv1-88A0A140T8N1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.17□□□□□ -0.14
Igkv1-88A0A140T8N1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.17□□□□□ -0.14
Igkv1-88A0A140T8N1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Igkv1-88A0A140T8N1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv1-88A0A140T8N1 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.16□□□□□ -0.14
Igkv1-88A0A140T8N1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.16□□□□□ -0.14
Igkv1-88A0A140T8N1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv1-88A0A140T8N1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv1-88A0A140T8N1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv1-88A0A140T8N1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv1-88A0A140T8N1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.15□□□□□ -0.14
Igkv1-88A0A140T8N1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv1-88A0A140T8N1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv1-88A0A140T8N1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv1-88A0A140T8N1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Igkv1-88A0A140T8N1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.14□□□□□ -0.15
Igkv1-88A0A140T8N1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv1-88A0A140T8N1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv1-88A0A140T8N1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Igkv1-88A0A140T8N1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv1-88A0A140T8N1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Igkv1-88A0A140T8N1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv1-88A0A140T8N1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv1-88A0A140T8N1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv1-88A0A140T8N1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv1-88A0A140T8N1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv1-88A0A140T8N1 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.13□□□□□ -0.15
Igkv1-88A0A140T8N1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv1-88A0A140T8N1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv1-88A0A140T8N1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv1-88A0A140T8N1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Igkv1-88A0A140T8N1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv1-88A0A140T8N1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Igkv1-88A0A140T8N1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv1-88A0A140T8N1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.11□□□□□ -0.15
Igkv1-88A0A140T8N1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv1-88A0A140T8N1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv1-88A0A140T8N1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv1-88A0A140T8N1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.1□□□□□ -0.15
Igkv1-88A0A140T8N1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv1-88A0A140T8N1 Gm8503-201ENSMUST00000118131 455 ntBASIC14.1□□□□□ -0.15
Igkv1-88A0A140T8N1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Igkv1-88A0A140T8N1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv1-88A0A140T8N1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv1-88A0A140T8N1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Igkv1-88A0A140T8N1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv1-88A0A140T8N1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv1-88A0A140T8N1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Igkv1-88A0A140T8N1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Igkv1-88A0A140T8N1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv1-88A0A140T8N1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms