Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.55■■□□□ 1.84
Atg4a-psA0A0G2JFS9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC26.53■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC26.52■■□□□ 1.84
Atg4a-psA0A0G2JFS9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.52■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.52■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Atg4a-psA0A0G2JFS9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.49■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.49■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Nsd1-206ENSMUST00000224918 1001 ntBASIC26.49■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC26.49■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Atg4a-psA0A0G2JFS9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC26.48■■□□□ 1.83
Atg4a-psA0A0G2JFS9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC26.48■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Atg4a-psA0A0G2JFS9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC26.45■■□□□ 1.83
Atg4a-psA0A0G2JFS9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC26.44■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Gm26766-202ENSMUST00000227544 2347 ntBASIC26.42■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Atg4a-psA0A0G2JFS9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Atg4a-psA0A0G2JFS9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC26.39■■□□□ 1.82
Atg4a-psA0A0G2JFS9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Atg4a-psA0A0G2JFS9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC26.39■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Atg4a-psA0A0G2JFS9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.38■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Atg4a-psA0A0G2JFS9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.36■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Atg4a-psA0A0G2JFS9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC26.36■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.34■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms