Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9n-2A0A0G2JDP3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9n-2A0A0G2JDP3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-2A0A0G2JDP3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.64■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9n-2A0A0G2JDP3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.63■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9n-2A0A0G2JDP3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav9n-2A0A0G2JDP3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Gm22567-201ENSMUST00000175542 342 ntBASIC15.61■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Gm14523-201ENSMUST00000117260 558 ntBASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Mir6538-201ENSMUST00000183713 110 ntBASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-2A0A0G2JDP3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Gm7332-201ENSMUST00000118351 454 ntBASIC15.58■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9n-2A0A0G2JDP3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9n-2A0A0G2JDP3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.57■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9n-2A0A0G2JDP3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms