Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.26■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.25■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv12-1A0A0B4J1H0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.24■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.24■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv12-1A0A0B4J1H0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.23■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.22■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv12-1A0A0B4J1H0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trbv12-1A0A0B4J1H0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.2■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv12-1A0A0B4J1H0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.2■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv12-1A0A0B4J1H0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Gm5921-201ENSMUST00000075898 882 ntBASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.16■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.16■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv12-1A0A0B4J1H0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.16■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.16■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Gm45444-201ENSMUST00000211394 898 ntBASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Trbv12-1A0A0B4J1H0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trbv12-1A0A0B4J1H0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv12-1A0A0B4J1H0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.14■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.14■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms