Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BC053393A0A0B4J1F6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BC053393A0A0B4J1F6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.21■□□□□ 0.35
BC053393A0A0B4J1F6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BC053393A0A0B4J1F6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
BC053393A0A0B4J1F6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.2■□□□□ 0.34
BC053393A0A0B4J1F6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
BC053393A0A0B4J1F6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.19■□□□□ 0.34
BC053393A0A0B4J1F6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BC053393A0A0B4J1F6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BC053393A0A0B4J1F6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BC053393A0A0B4J1F6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC053393A0A0B4J1F6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC053393A0A0B4J1F6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC053393A0A0B4J1F6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.18■□□□□ 0.34
BC053393A0A0B4J1F6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC053393A0A0B4J1F6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BC053393A0A0B4J1F6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC053393A0A0B4J1F6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
BC053393A0A0B4J1F6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC053393A0A0B4J1F6 Gm45364-201ENSMUST00000210883 159 ntBASIC17.17■□□□□ 0.34
BC053393A0A0B4J1F6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
BC053393A0A0B4J1F6 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.17■□□□□ 0.34
BC053393A0A0B4J1F6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC053393A0A0B4J1F6 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.17■□□□□ 0.34
BC053393A0A0B4J1F6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
BC053393A0A0B4J1F6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BC053393A0A0B4J1F6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.16■□□□□ 0.34
BC053393A0A0B4J1F6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
BC053393A0A0B4J1F6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BC053393A0A0B4J1F6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BC053393A0A0B4J1F6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.16■□□□□ 0.34
BC053393A0A0B4J1F6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC053393A0A0B4J1F6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.16■□□□□ 0.34
BC053393A0A0B4J1F6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC053393A0A0B4J1F6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BC053393A0A0B4J1F6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.14■□□□□ 0.33
BC053393A0A0B4J1F6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC053393A0A0B4J1F6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.14■□□□□ 0.33
BC053393A0A0B4J1F6 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.14■□□□□ 0.33
BC053393A0A0B4J1F6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BC053393A0A0B4J1F6 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.14■□□□□ 0.33
BC053393A0A0B4J1F6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BC053393A0A0B4J1F6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BC053393A0A0B4J1F6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BC053393A0A0B4J1F6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC053393A0A0B4J1F6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
BC053393A0A0B4J1F6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC053393A0A0B4J1F6 Gm9812-201ENSMUST00000061934 968 ntBASIC17.12■□□□□ 0.33
BC053393A0A0B4J1F6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
BC053393A0A0B4J1F6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BC053393A0A0B4J1F6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BC053393A0A0B4J1F6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BC053393A0A0B4J1F6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC053393A0A0B4J1F6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.1■□□□□ 0.33
BC053393A0A0B4J1F6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BC053393A0A0B4J1F6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.1■□□□□ 0.33
BC053393A0A0B4J1F6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC053393A0A0B4J1F6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC053393A0A0B4J1F6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.1■□□□□ 0.33
BC053393A0A0B4J1F6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC053393A0A0B4J1F6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms