Protein–RNA interactions for Protein: A0A075B6C1

Trav7-4, T cell receptor alpha variable 7-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-4A0A075B6C1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Trav7-4A0A075B6C1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-4A0A075B6C1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-4A0A075B6C1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav7-4A0A075B6C1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-4A0A075B6C1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Trav7-4A0A075B6C1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-4A0A075B6C1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-4A0A075B6C1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-4A0A075B6C1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav7-4A0A075B6C1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.46■□□□□ 0.23
Trav7-4A0A075B6C1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav7-4A0A075B6C1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-4A0A075B6C1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav7-4A0A075B6C1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav7-4A0A075B6C1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav7-4A0A075B6C1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-4A0A075B6C1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav7-4A0A075B6C1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav7-4A0A075B6C1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-4A0A075B6C1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-4A0A075B6C1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-4A0A075B6C1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-4A0A075B6C1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-4A0A075B6C1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav7-4A0A075B6C1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-4A0A075B6C1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-4A0A075B6C1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-4A0A075B6C1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-4A0A075B6C1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Trav7-4A0A075B6C1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-4A0A075B6C1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-4A0A075B6C1 Gm22567-201ENSMUST00000175542 342 ntBASIC16.44■□□□□ 0.22
Trav7-4A0A075B6C1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-4A0A075B6C1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Trav7-4A0A075B6C1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-4A0A075B6C1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.43■□□□□ 0.22
Trav7-4A0A075B6C1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-4A0A075B6C1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav7-4A0A075B6C1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav7-4A0A075B6C1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-4A0A075B6C1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Trav7-4A0A075B6C1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-4A0A075B6C1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-4A0A075B6C1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-4A0A075B6C1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav7-4A0A075B6C1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav7-4A0A075B6C1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-4A0A075B6C1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-4A0A075B6C1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav7-4A0A075B6C1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-4A0A075B6C1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-4A0A075B6C1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-4A0A075B6C1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-4A0A075B6C1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-4A0A075B6C1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-4A0A075B6C1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Trav7-4A0A075B6C1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-4A0A075B6C1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-4A0A075B6C1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav7-4A0A075B6C1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-4A0A075B6C1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-4A0A075B6C1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-4A0A075B6C1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-4A0A075B6C1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav7-4A0A075B6C1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-4A0A075B6C1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav7-4A0A075B6C1 Gm24970-201ENSMUST00000175582 82 ntBASIC16.39■□□□□ 0.21
Trav7-4A0A075B6C1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
Trav7-4A0A075B6C1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-4A0A075B6C1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-4A0A075B6C1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav7-4A0A075B6C1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav7-4A0A075B6C1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-4A0A075B6C1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-4A0A075B6C1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-4A0A075B6C1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav7-4A0A075B6C1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-4A0A075B6C1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-4A0A075B6C1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.38■□□□□ 0.21
Trav7-4A0A075B6C1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-4A0A075B6C1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-4A0A075B6C1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-4A0A075B6C1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-4A0A075B6C1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-4A0A075B6C1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-4A0A075B6C1 Gm37136-201ENSMUST00000194368 194 ntBASIC16.37■□□□□ 0.21
Trav7-4A0A075B6C1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-4A0A075B6C1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-4A0A075B6C1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-4A0A075B6C1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-4A0A075B6C1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-4A0A075B6C1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-4A0A075B6C1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-4A0A075B6C1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-4A0A075B6C1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-4A0A075B6C1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-4A0A075B6C1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trav7-4A0A075B6C1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-4A0A075B6C1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms