Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4d-3A0A075B625 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4d-3A0A075B625 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4d-3A0A075B625 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4d-3A0A075B625 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav4d-3A0A075B625 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav4d-3A0A075B625 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav4d-3A0A075B625 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4d-3A0A075B625 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4d-3A0A075B625 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4d-3A0A075B625 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4d-3A0A075B625 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.7□□□□□ -0.06
Trav4d-3A0A075B625 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4d-3A0A075B625 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4d-3A0A075B625 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.7□□□□□ -0.06
Trav4d-3A0A075B625 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4d-3A0A075B625 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4d-3A0A075B625 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4d-3A0A075B625 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav4d-3A0A075B625 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trav4d-3A0A075B625 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4d-3A0A075B625 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4d-3A0A075B625 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav4d-3A0A075B625 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4d-3A0A075B625 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.69□□□□□ -0.06
Trav4d-3A0A075B625 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav4d-3A0A075B625 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4d-3A0A075B625 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4d-3A0A075B625 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav4d-3A0A075B625 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav4d-3A0A075B625 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4d-3A0A075B625 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4d-3A0A075B625 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4d-3A0A075B625 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav4d-3A0A075B625 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4d-3A0A075B625 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trav4d-3A0A075B625 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav4d-3A0A075B625 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4d-3A0A075B625 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav4d-3A0A075B625 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav4d-3A0A075B625 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4d-3A0A075B625 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4d-3A0A075B625 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4d-3A0A075B625 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4d-3A0A075B625 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Trav4d-3A0A075B625 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4d-3A0A075B625 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4d-3A0A075B625 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4d-3A0A075B625 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4d-3A0A075B625 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4d-3A0A075B625 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4d-3A0A075B625 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4d-3A0A075B625 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4d-3A0A075B625 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav4d-3A0A075B625 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav4d-3A0A075B625 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4d-3A0A075B625 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4d-3A0A075B625 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4d-3A0A075B625 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4d-3A0A075B625 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4d-3A0A075B625 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4d-3A0A075B625 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4d-3A0A075B625 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4d-3A0A075B625 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms