Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav13d-1A0A075B606 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-1A0A075B606 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-1A0A075B606 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-1A0A075B606 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav13d-1A0A075B606 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav13d-1A0A075B606 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-1A0A075B606 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-1A0A075B606 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-1A0A075B606 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav13d-1A0A075B606 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-1A0A075B606 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Gm15546-201ENSMUST00000122095 826 ntBASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-1A0A075B606 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-1A0A075B606 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav13d-1A0A075B606 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-1A0A075B606 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-1A0A075B606 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-1A0A075B606 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav13d-1A0A075B606 Gm45444-201ENSMUST00000211394 898 ntBASIC15.71■□□□□ 0.11
Trav13d-1A0A075B606 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-1A0A075B606 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.71■□□□□ 0.11
Trav13d-1A0A075B606 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-1A0A075B606 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-1A0A075B606 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav13d-1A0A075B606 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav13d-1A0A075B606 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-1A0A075B606 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav13d-1A0A075B606 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-1A0A075B606 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-1A0A075B606 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-1A0A075B606 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-1A0A075B606 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-1A0A075B606 Gm43566-201ENSMUST00000196851 808 ntBASIC15.7■□□□□ 0.1
Trav13d-1A0A075B606 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-1A0A075B606 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Gm15820-201ENSMUST00000201566 728 ntBASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav13d-1A0A075B606 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav13d-1A0A075B606 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-1A0A075B606 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-1A0A075B606 Gm13238-201ENSMUST00000117655 780 ntBASIC15.67■□□□□ 0.1
Trav13d-1A0A075B606 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav13d-1A0A075B606 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav13d-1A0A075B606 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-1A0A075B606 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-1A0A075B606 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-1A0A075B606 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-1A0A075B606 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-1A0A075B606 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav13d-1A0A075B606 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav13d-1A0A075B606 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-1A0A075B606 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-1A0A075B606 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-1A0A075B606 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-1A0A075B606 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-1A0A075B606 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-1A0A075B606 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav13d-1A0A075B606 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-1A0A075B606 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-1A0A075B606 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-1A0A075B606 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms