Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9-1A0A075B601 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9-1A0A075B601 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9-1A0A075B601 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav9-1A0A075B601 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9-1A0A075B601 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
Trav9-1A0A075B601 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9-1A0A075B601 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9-1A0A075B601 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Trav9-1A0A075B601 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9-1A0A075B601 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav9-1A0A075B601 Gm44428-201ENSMUST00000204474 874 ntBASIC16.8■□□□□ 0.28
Trav9-1A0A075B601 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9-1A0A075B601 Gm9806-201ENSMUST00000051080 552 ntBASIC16.8■□□□□ 0.28
Trav9-1A0A075B601 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trav9-1A0A075B601 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.8■□□□□ 0.28
Trav9-1A0A075B601 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trav9-1A0A075B601 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav9-1A0A075B601 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9-1A0A075B601 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9-1A0A075B601 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.79■□□□□ 0.28
Trav9-1A0A075B601 Gm22567-201ENSMUST00000175542 342 ntBASIC16.79■□□□□ 0.28
Trav9-1A0A075B601 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9-1A0A075B601 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav9-1A0A075B601 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav9-1A0A075B601 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav9-1A0A075B601 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9-1A0A075B601 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav9-1A0A075B601 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9-1A0A075B601 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.78■□□□□ 0.28
Trav9-1A0A075B601 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9-1A0A075B601 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9-1A0A075B601 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9-1A0A075B601 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav9-1A0A075B601 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav9-1A0A075B601 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9-1A0A075B601 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trav9-1A0A075B601 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-1A0A075B601 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-1A0A075B601 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-1A0A075B601 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-1A0A075B601 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-1A0A075B601 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-1A0A075B601 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9-1A0A075B601 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-1A0A075B601 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-1A0A075B601 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-1A0A075B601 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-1A0A075B601 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9-1A0A075B601 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9-1A0A075B601 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9-1A0A075B601 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav9-1A0A075B601 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9-1A0A075B601 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9-1A0A075B601 Gm11687-201ENSMUST00000118911 886 ntBASIC16.74■□□□□ 0.27
Trav9-1A0A075B601 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9-1A0A075B601 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav9-1A0A075B601 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9-1A0A075B601 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.73■□□□□ 0.27
Trav9-1A0A075B601 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9-1A0A075B601 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9-1A0A075B601 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav9-1A0A075B601 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav9-1A0A075B601 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9-1A0A075B601 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav9-1A0A075B601 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Trav9-1A0A075B601 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9-1A0A075B601 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.72■□□□□ 0.27
Trav9-1A0A075B601 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav9-1A0A075B601 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9-1A0A075B601 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.72■□□□□ 0.27
Trav9-1A0A075B601 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.72■□□□□ 0.27
Trav9-1A0A075B601 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.72■□□□□ 0.27
Trav9-1A0A075B601 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9-1A0A075B601 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Trav9-1A0A075B601 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9-1A0A075B601 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Trav9-1A0A075B601 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9-1A0A075B601 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9-1A0A075B601 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms