Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-54A0A075B5W5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-54A0A075B5W5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-54A0A075B5W5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ighv1-54A0A075B5W5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-54A0A075B5W5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-54A0A075B5W5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-54A0A075B5W5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-54A0A075B5W5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ighv1-54A0A075B5W5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-54A0A075B5W5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-54A0A075B5W5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-54A0A075B5W5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-54A0A075B5W5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-54A0A075B5W5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-54A0A075B5W5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.33■□□□□ 0.69
Ighv1-54A0A075B5W5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ighv1-54A0A075B5W5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ighv1-54A0A075B5W5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Ighv1-54A0A075B5W5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-54A0A075B5W5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ighv1-54A0A075B5W5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-54A0A075B5W5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ighv1-54A0A075B5W5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-54A0A075B5W5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.32■□□□□ 0.68
Ighv1-54A0A075B5W5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-54A0A075B5W5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-54A0A075B5W5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-54A0A075B5W5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-54A0A075B5W5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Ighv1-54A0A075B5W5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.31■□□□□ 0.68
Ighv1-54A0A075B5W5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.31■□□□□ 0.68
Ighv1-54A0A075B5W5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ighv1-54A0A075B5W5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.31■□□□□ 0.68
Ighv1-54A0A075B5W5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-54A0A075B5W5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-54A0A075B5W5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.3■□□□□ 0.68
Ighv1-54A0A075B5W5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.3■□□□□ 0.68
Ighv1-54A0A075B5W5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-54A0A075B5W5 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.3■□□□□ 0.68
Ighv1-54A0A075B5W5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.3■□□□□ 0.68
Ighv1-54A0A075B5W5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-54A0A075B5W5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.3■□□□□ 0.68
Ighv1-54A0A075B5W5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.3■□□□□ 0.68
Ighv1-54A0A075B5W5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-54A0A075B5W5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-54A0A075B5W5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ighv1-54A0A075B5W5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-54A0A075B5W5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-54A0A075B5W5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-54A0A075B5W5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Ighv1-54A0A075B5W5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-54A0A075B5W5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-54A0A075B5W5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-54A0A075B5W5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Ighv1-54A0A075B5W5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ighv1-54A0A075B5W5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.27■□□□□ 0.68
Ighv1-54A0A075B5W5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Ighv1-54A0A075B5W5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.27■□□□□ 0.68
Ighv1-54A0A075B5W5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-54A0A075B5W5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-54A0A075B5W5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.27■□□□□ 0.68
Ighv1-54A0A075B5W5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-54A0A075B5W5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.27■□□□□ 0.68
Ighv1-54A0A075B5W5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ighv1-54A0A075B5W5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ighv1-54A0A075B5W5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Ighv1-54A0A075B5W5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-54A0A075B5W5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ighv1-54A0A075B5W5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ighv1-54A0A075B5W5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-54A0A075B5W5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-54A0A075B5W5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ighv1-54A0A075B5W5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-54A0A075B5W5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-54A0A075B5W5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-54A0A075B5W5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.25■□□□□ 0.67
Ighv1-54A0A075B5W5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.25■□□□□ 0.67
Ighv1-54A0A075B5W5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-54A0A075B5W5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-54A0A075B5W5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-54A0A075B5W5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.24■□□□□ 0.67
Ighv1-54A0A075B5W5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-54A0A075B5W5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-54A0A075B5W5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-54A0A075B5W5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.24■□□□□ 0.67
Ighv1-54A0A075B5W5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-54A0A075B5W5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-54A0A075B5W5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-54A0A075B5W5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-54A0A075B5W5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-54A0A075B5W5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.23■□□□□ 0.67
Ighv1-54A0A075B5W5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-54A0A075B5W5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-54A0A075B5W5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-54A0A075B5W5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.22■□□□□ 0.67
Ighv1-54A0A075B5W5 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.22■□□□□ 0.67
Ighv1-54A0A075B5W5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-54A0A075B5W5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-54A0A075B5W5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms