Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc166S4R181 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Gm27892-201ENSMUST00000185017 106 ntBASIC13.16□□□□□ -0.3
Ccdc166S4R181 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccdc166S4R181 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.16□□□□□ -0.3
Ccdc166S4R181 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.16□□□□□ -0.3
Ccdc166S4R181 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.16□□□□□ -0.3
Ccdc166S4R181 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.16□□□□□ -0.3
Ccdc166S4R181 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.16□□□□□ -0.3
Ccdc166S4R181 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.16□□□□□ -0.3
Ccdc166S4R181 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc166S4R181 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.15□□□□□ -0.3
Ccdc166S4R181 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc166S4R181 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.15□□□□□ -0.3
Ccdc166S4R181 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc166S4R181 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc166S4R181 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Gm12742-201ENSMUST00000117326 410 ntBASIC13.14□□□□□ -0.31
Ccdc166S4R181 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Gm27701-201ENSMUST00000184498 110 ntBASIC13.14□□□□□ -0.31
Ccdc166S4R181 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc166S4R181 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.14□□□□□ -0.31
Ccdc166S4R181 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccdc166S4R181 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.14□□□□□ -0.31
Ccdc166S4R181 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.14□□□□□ -0.31
Ccdc166S4R181 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms