Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Gm29649-201ENSMUST00000185649 419 ntBASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Gm7561-201ENSMUST00000211203 886 ntBASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm8213-201ENSMUST00000118191 441 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm12403-201ENSMUST00000121384 959 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 AY702102-202ENSMUST00000194651 1173 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Gm26315-201ENSMUST00000083890 321 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.19□□□□□ -0.14
Smarcb1Q9Z0H3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Mir7085-201ENSMUST00000184353 66 ntBASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms